Package: VanillaICE

Version: 1.45.0

Command: chmod a+r VanillaICE -R && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data VanillaICE

StartedAt: 2019-04-08 21:09:45 -0400 (Mon, 08 Apr 2019)

EndedAt: 2019-04-08 21:10:17 -0400 (Mon, 08 Apr 2019)

EllapsedTime: 32.2 seconds

RetCode: 1

Status:  ERROR

PackageFile: VanillaICE_1.45.0.tar.gz

PackageFileSize: 1.069 MiB

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### Running command:
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###   chmod a+r VanillaICE -R && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data VanillaICE
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* checking for file 'VanillaICE/DESCRIPTION' ... OK
* preparing 'VanillaICE':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package 'VanillaICE' ...
** libs
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c rinit.c -o rinit.o
C:/Rtools/mingw_64/bin/gcc  -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mtune=generic -c viterbi.c -o viterbi.o
C:/Rtools/mingw_64/bin/gcc -shared -s -static-libgcc -o VanillaICE.dll tmp.def rinit.o viterbi.o -lm -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpa0VVfR/Rinst164c44011c52/00LOCK-VanillaICE/00new/VanillaICE/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Error in reconcilePropertiesAndPrototype(name, slots, prototype, superClasses,  : 
  The prototype for class "SnpDataFrame" has undefined slot(s): 'isSnp'
Error: unable to load R code in package 'VanillaICE'
Execution halted
ERROR: lazy loading failed for package 'VanillaICE'
* removing 'C:/Users/biocbuild/bbs-3.9-bioc/tmpdir/Rtmpa0VVfR/Rinst164c44011c52/VanillaICE'
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ERROR: package installation failed