Back to Multiple platform build/check report for BioC 3.6
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

INSTALL report for RedeR on tokay1

This page was generated on 2018-04-12 13:21:01 -0400 (Thu, 12 Apr 2018).

Package 1151/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RedeR 1.26.0
Mauro Castro
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/RedeR
Branch: RELEASE_3_6
Last Commit: a68013c
Last Changed Date: 2017-10-30 12:39:35 -0400 (Mon, 30 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: RedeR
Version: 1.26.0
Command: rm -rf RedeR.buildbin-libdir && mkdir RedeR.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/RedeR_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=RedeR.buildbin-libdir --merge-multiarch RedeR_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL RedeR_1.26.0.zip && rm RedeR_1.26.0.tar.gz RedeR_1.26.0.zip
StartedAt: 2018-04-11 18:15:44 -0400 (Wed, 11 Apr 2018)
EndedAt: 2018-04-11 18:17:08 -0400 (Wed, 11 Apr 2018)
EllapsedTime: 83.9 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf RedeR.buildbin-libdir && mkdir RedeR.buildbin-libdir  && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/RedeR_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=RedeR.buildbin-libdir --merge-multiarch RedeR_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL RedeR_1.26.0.zip  && rm RedeR_1.26.0.tar.gz RedeR_1.26.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 8427k  100 8427k    0     0  41.1M      0 --:--:-- --:--:-- --:--:-- 41.9M

install for i386

* installing *source* package 'RedeR' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'RedeR'
    finding HTML links ... done
    RedPort-class                           html  
    RedPort                                 html  
    RedeR-package                           html  
    RedeR.data                              html  
    addEdgeBetweenContainers                html  
    addEdges                                html  
    addGraph                                html  
    addLegend                               html  
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpeoqijT/R.INSTALL1158402b7649/RedeR/man/addLegend.Rd:31: missing file link 'att.setv'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpeoqijT/R.INSTALL1158402b7649/RedeR/man/addLegend.Rd:31: missing file link 'att.sete'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpeoqijT/R.INSTALL1158402b7649/RedeR/man/addLegend.Rd:61: missing file link 'att.setv'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/RtmpeoqijT/R.INSTALL1158402b7649/RedeR/man/addLegend.Rd:62: missing file link 'att.sete'
    addNodes                                html  
    addSeries                               html  
    addSubgraph                             html  
    addSubgraph.list                        html  
    att                                     html  
    calld                                   html  
    cea                                     html  
    deSelectEdges                           html  
    deSelectGraph                           html  
    deSelectNodes                           html  
    deleteEdges                             html  
    deleteNodes                             html  
    deleteSelectedEdges                     html  
    deleteSelectedNodes                     html  
    duplicateGraph                          html  
    exitd                                   html  
    getContainerComponets                   html  
    getEdgeIDs                              html  
    getEdges                                html  
    getGraph                                html  
    getNodeIDs                              html  
    getNodes                                html  
    getSourceEdgeIDs                        html  
    getTargetEdgeIDs                        html  
    gtoy.rm                                 html  
    isDynamicsActive                        html  
    mergeNodes                              html  
    mergeOutEdges                           html  
    nestNodes                               html  
    nesthc                                  html  
    ping                                    html  
    relax                                   html  
    resetd                                  html  
    selectAllEdges                          html  
    selectAllNodes                          html  
    selectEdges                             html  
    selectGraph                             html  
    selectNodes                             html  
    setArrowDirection                       html  
    subg                                    html  
    updateContainerSize                     html  
    updateGraph                             html  
    version                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'RedeR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RedeR' as RedeR_1.26.0.zip
* DONE (RedeR)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'RedeR' successfully unpacked and MD5 sums checked
In R CMD INSTALL