To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("vtpnet")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: Release (3.4)
variant-transcription factor-phenotype networks, inspired by Maurano et al., Science (2012), PMID 22955828
Author: VJ Carey <stvjc at channing.harvard.edu>
Maintainer: VJ Carey <stvjc at channing.harvard.edu>
Citation (from within R,
enter citation("vtpnet")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("vtpnet")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("vtpnet")
R Script | vtpnet: variant-transcription factor-network tools | |
Reference Manual |
biocViews | Network, Software |
Version | 0.14.0 |
In Bioconductor since | BioC 2.13 (R-3.0) (3.5 years) |
License | Artistic-2.0 |
Depends | R (>= 3.0.0), graph, GenomicRanges, gwascat, doParallel, foreach |
Imports | |
LinkingTo | |
Suggests | MotifDb, VariantAnnotation, Rgraphviz |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | vtpnet_0.14.0.tar.gz |
Windows Binary | vtpnet_0.14.0.zip |
Mac OS X 10.9 (Mavericks) | vtpnet_0.14.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/vtpnet/tree/release-3.4 |
Package Short Url | http://bioconductor.org/packages/vtpnet/ |
Package Downloads Report | Download Stats |
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