| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-05-31 19:29:09 -0400 (Fri, 31 May 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 RC (2024-04-16 r86468) -- "Puppy Cup" | 4669 |
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup" | 4404 |
| merida1 | macOS 12.7.4 Monterey | x86_64 | 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" | 4431 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" | 4384 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1301/2233 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MsBackendRawFileReader 1.11.2 (landing page) Christian Panse
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.4 Monterey / x86_64 | OK | OK | OK | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
|
To the developers/maintainers of the MsBackendRawFileReader package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MsBackendRawFileReader.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: MsBackendRawFileReader |
| Version: 1.11.2 |
| Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:MsBackendRawFileReader.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings MsBackendRawFileReader_1.11.2.tar.gz |
| StartedAt: 2024-05-31 05:55:40 -0400 (Fri, 31 May 2024) |
| EndedAt: 2024-05-31 06:00:52 -0400 (Fri, 31 May 2024) |
| EllapsedTime: 311.6 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: MsBackendRawFileReader.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:MsBackendRawFileReader.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings MsBackendRawFileReader_1.11.2.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.20-bioc/meat/MsBackendRawFileReader.Rcheck’
* using R version 4.4.0 RC (2024-04-16 r86468)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
* running under: Ubuntu 22.04.4 LTS
* using session charset: UTF-8
* checking for file ‘MsBackendRawFileReader/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MsBackendRawFileReader’ version ‘1.11.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MsBackendRawFileReader’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
ioBenchmark 46.264 4.001 12.129
MsBackendRawFileReader 7.716 1.709 8.518
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: OK
MsBackendRawFileReader.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD INSTALL MsBackendRawFileReader ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.20-bioc/R/site-library’ * installing *source* package ‘MsBackendRawFileReader’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MsBackendRawFileReader)
MsBackendRawFileReader.Rcheck/tests/testthat.Rout
R version 4.4.0 RC (2024-04-16 r86468) -- "Puppy Cup"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library("testthat")
> library("MsBackendRawFileReader")
Loading required package: Spectra
Loading required package: S4Vectors
Loading required package: stats4
Loading required package: BiocGenerics
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
pmin.int, rank, rbind, rownames, sapply, setdiff, table, tapply,
union, unique, unsplit, which.max, which.min
Attaching package: 'S4Vectors'
The following object is masked from 'package:utils':
findMatches
The following objects are masked from 'package:base':
I, expand.grid, unname
Loading required package: BiocParallel
Loading required package: ProtGenerics
Attaching package: 'ProtGenerics'
The following object is masked from 'package:stats':
smooth
> library("Spectra")
>
>
> sample_raw_file <- file.path(system.file(package = "rawrr"),
+ 'extdata', 'sample.raw')
>
> sample_mzXML_file <- file.path(path.package(package = 'MsBackendRawFileReader'),
+ 'extdata', 'sample.mzXML')
>
>
> sample_raw <- backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(), files = sample_raw_file)
>
>
> #sample_mzr <- backendInitialize(MsBackendMzR(), files = sample_mzXML_file)
>
>
> mgf_file <- file.path(system.file(package = "MsBackendRawFileReader"),
+ 'extdata', '3159619b11ed_4590_9594.mgf')
>
>
> rv <- lapply(1:2, function(x){
+ file.copy(from = sample_raw_file, to = tempfile(fileext='.raw'))})
>
>
> register(SnowParam(workers = 1, type = "SOCK") , default = TRUE);
> sample_raw_2 <- backendInitialize(MsBackendRawFileReader(),
+ files = file.path(tempdir(),
+ list.files(path = tempdir(), pattern = 'raw$')))
>
>
> test_check("MsBackendRawFileReader")
[ FAIL 0 | WARN 1 | SKIP 2 | PASS 21 ]
══ Skipped tests (2) ═══════════════════════════════════════════════════════════
• isFALSE(file.exists(sample_mzXML_file)) is TRUE (1):
'test_MsBackendMzR_MsBackendRawFileReader.R:1:1'
• isFALSE(require(MsBackendRawMgf)) is TRUE (1): 'test_top_n_mgf.R:1:1'
[ FAIL 0 | WARN 1 | SKIP 2 | PASS 21 ]
>
>
> be <- Spectra::backendInitialize(MsBackendRawFileReader::MsBackendRawFileReader(),
+ files = c(sample_raw_file))
>
> ## Run the MsBackend spectra variable test suite
> test_suite <- system.file("test_backends", "test_MsBackend",
+ package = "Spectra")
>
> #res <- test_file(paste0(test_suite, "/test_spectra_variables.R"),
> # reporter = check_reporter(), stop_on_failure = TRUE)
>
>
> ## Run the whole suite.
> res <- test_dir(test_suite, stop_on_failure = TRUE)
✔ | F W S OK | Context
⠏ | 0 | peaks_variables
⠙ | 2 | peaks_variables
⠸ | 4 | peaks_variables
✔ | 4 | peaks_variables [4.1s]
⠏ | 0 | spectra_subsetting
⠋ | 1 | spectra_subsetting
⠇ | 19 | spectra_subsetting
⠹ | 33 | spectra_subsetting
⠦ | 47 | spectra_subsetting
⠧ | 58 | spectra_subsetting
⠹ | 73 | spectra_subsetting
⠇ | 89 | spectra_subsetting
⠏ | 100 | spectra_subsetting
⠴ | 116 | spectra_subsetting
⠋ | 131 | spectra_subsetting
⠧ | 148 | spectra_subsetting
⠸ | 164 | spectra_subsetting
⠧ | 178 | spectra_subsetting
⠴ | 196 | spectra_subsetting
⠋ | 211 | spectra_subsetting
⠇ | 229 | spectra_subsetting
⠸ | 244 | spectra_subsetting
⠙ | 262 | spectra_subsetting
⠦ | 277 | spectra_subsetting
⠼ | 295 | spectra_subsetting
⠏ | 310 | spectra_subsetting
⠴ | 326 | spectra_subsetting
⠏ | 340 | spectra_subsetting
⠼ | 355 | spectra_subsetting
⠙ | 372 | spectra_subsetting
⠼ | 385 | spectra_subsetting
⠹ | 403 | spectra_subsetting
⠴ | 416 | spectra_subsetting
⠋ | 431 | spectra_subsetting
⠼ | 445 | spectra_subsetting
⠏ | 460 | spectra_subsetting
⠴ | 476 | spectra_subsetting
⠏ | 490 | spectra_subsetting
⠧ | 508 | spectra_subsetting
⠏ | 520 | spectra_subsetting
⠼ | 535 | spectra_subsetting
⠦ | 547 | spectra_subsetting
⠙ | 562 | spectra_subsetting
⠧ | 578 | spectra_subsetting
⠇ | 589 | spectra_subsetting
⠴ | 606 | spectra_subsetting
⠇ | 619 | spectra_subsetting
⠸ | 634 | spectra_subsetting
⠇ | 649 | spectra_subsetting
⠸ | 664 | spectra_subsetting
⠏ | 680 | spectra_subsetting
⠸ | 694 | spectra_subsetting
⠙ | 712 | spectra_subsetting
⠦ | 727 | spectra_subsetting
⠼ | 745 | spectra_subsetting
⠏ | 760 | spectra_subsetting
⠼ | 775 | spectra_subsetting
⠏ | 790 | spectra_subsetting
⠼ | 805 | spectra_subsetting
⠋ | 821 | spectra_subsetting
⠹ | 833 | spectra_subsetting
⠏ | 850 | spectra_subsetting
⠸ | 864 | spectra_subsetting
⠏ | 880 | spectra_subsetting
⠼ | 895 | spectra_subsetting
⠏ | 910 | spectra_subsetting
⠼ | 925 | spectra_subsetting
⠦ | 937 | spectra_subsetting
⠹ | 953 | spectra_subsetting
⠦ | 967 | spectra_subsetting
⠹ | 983 | spectra_subsetting
⠦ | 997 | spectra_subsetting
⠙ | 1012 | spectra_subsetting
⠏ | 1030 | spectra_subsetting
⠼ | 1045 | spectra_subsetting
⠹ | 1063 | spectra_subsetting
⠼ | 1075 | spectra_subsetting
⠹ | 1093 | spectra_subsetting
⠧ | 1108 | spectra_subsetting
⠸ | 1124 | spectra_subsetting
⠧ | 1138 | spectra_subsetting
⠙ | 1152 | spectra_subsetting
⠼ | 1165 | spectra_subsetting
⠦ | 1177 | spectra_subsetting
⠹ | 1193 | spectra_subsetting
⠦ | 1207 | spectra_subsetting
⠙ | 1222 | spectra_subsetting
⠦ | 1237 | spectra_subsetting
⠙ | 1252 | spectra_subsetting
⠏ | 1270 | spectra_subsetting
⠹ | 1283 | spectra_subsetting
⠏ | 1300 | spectra_subsetting
⠼ | 1315 | spectra_subsetting
⠙ | 1332 | spectra_subsetting
⠼ | 1345 | spectra_subsetting
⠏ | 1360 | spectra_subsetting
⠼ | 1375 | spectra_subsetting
⠏ | 1390 | spectra_subsetting
⠧ | 1408 | spectra_subsetting
⠋ | 1421 | spectra_subsetting
⠴ | 1436 | spectra_subsetting
⠧ | 1448 | spectra_subsetting
⠙ | 1462 | spectra_subsetting
⠦ | 1477 | spectra_subsetting
⠙ | 1492 | spectra_subsetting
⠇ | 1509 | spectra_subsetting
⠙ | 1522 | spectra_subsetting
⠏ | 1540 | spectra_subsetting
⠼ | 1555 | spectra_subsetting
⠹ | 1573 | spectra_subsetting
⠧ | 1588 | spectra_subsetting
⠸ | 1604 | spectra_subsetting
⠧ | 1618 | spectra_subsetting
⠹ | 1633 | spectra_subsetting
⠇ | 1649 | spectra_subsetting
⠹ | 1663 | spectra_subsetting
⠏ | 1680 | spectra_subsetting
⠹ | 1693 | spectra_subsetting
⠋ | 1711 | spectra_subsetting
⠴ | 1726 | spectra_subsetting
⠧ | 1728 | spectra_subsetting
⠏ | 1730 | spectra_subsetting
⠙ | 1732 | spectra_subsetting
⠸ | 1734 | spectra_subsetting
⠦ | 1737 | spectra_subsetting
⠏ | 1740 | spectra_subsetting
⠙ | 1742 | spectra_subsetting
⠼ | 1745 | spectra_subsetting
⠧ | 1748 | spectra_subsetting
⠏ | 1750 | spectra_subsetting
⠙ | 1752 | spectra_subsetting
⠸ | 1754 | spectra_subsetting
⠴ | 1756 | spectra_subsetting
⠧ | 1758 | spectra_subsetting
⠏ | 1760 | spectra_subsetting
⠙ | 1762 | spectra_subsetting
⠸ | 1764 | spectra_subsetting
⠴ | 1766 | spectra_subsetting
⠧ | 1768 | spectra_subsetting
⠏ | 1770 | spectra_subsetting
⠙ | 1772 | spectra_subsetting
⠸ | 1774 | spectra_subsetting
⠴ | 1776 | spectra_subsetting
⠧ | 1778 | spectra_subsetting
⠏ | 1780 | spectra_subsetting
⠙ | 1782 | spectra_subsetting
⠸ | 1784 | spectra_subsetting
⠦ | 1787 | spectra_subsetting
⠇ | 1789 | spectra_subsetting
⠙ | 1792 | spectra_subsetting
⠸ | 1794 | spectra_subsetting
⠴ | 1796 | spectra_subsetting
⠧ | 1798 | spectra_subsetting
⠏ | 1800 | spectra_subsetting
⠹ | 1803 | spectra_subsetting
⠼ | 1805 | spectra_subsetting
⠦ | 1807 | spectra_subsetting
⠇ | 1809 | spectra_subsetting
⠋ | 1811 | spectra_subsetting
⠹ | 1813 | spectra_subsetting
⠼ | 1815 | spectra_subsetting
⠦ | 1817 | spectra_subsetting
⠇ | 1819 | spectra_subsetting
⠋ | 1821 | spectra_subsetting
⠹ | 1823 | spectra_subsetting
⠼ | 1825 | spectra_subsetting
⠦ | 1827 | spectra_subsetting
⠇ | 1829 | spectra_subsetting
⠋ | 1831 | spectra_subsetting
⠹ | 1833 | spectra_subsetting
⠼ | 1835 | spectra_subsetting
⠦ | 1837 | spectra_subsetting
⠇ | 1839 | spectra_subsetting
⠋ | 1841 | spectra_subsetting
⠹ | 1843 | spectra_subsetting
⠼ | 1845 | spectra_subsetting
⠦ | 1847 | spectra_subsetting
⠏ | 1850 | spectra_subsetting
⠙ | 1852 | spectra_subsetting
⠼ | 1855 | spectra_subsetting
⠧ | 1858 | spectra_subsetting
⠋ | 1861 | spectra_subsetting
⠸ | 1864 | spectra_subsetting
⠦ | 1867 | spectra_subsetting
⠏ | 1870 | spectra_subsetting
⠹ | 1873 | spectra_subsetting
⠴ | 1876 | spectra_subsetting
⠇ | 1879 | spectra_subsetting
⠙ | 1882 | spectra_subsetting
⠼ | 1885 | spectra_subsetting
⠧ | 1888 | spectra_subsetting
⠋ | 1891 | spectra_subsetting
⠸ | 1894 | spectra_subsetting
⠴ | 1896 | spectra_subsetting
⠧ | 1898 | spectra_subsetting
⠋ | 1901 | spectra_subsetting
⠸ | 1904 | spectra_subsetting
⠦ | 1907 | spectra_subsetting
⠏ | 1910 | spectra_subsetting
⠹ | 1913 | spectra_subsetting
⠴ | 1916 | spectra_subsetting
⠇ | 1919 | spectra_subsetting
⠙ | 1922 | spectra_subsetting
⠼ | 1925 | spectra_subsetting
⠧ | 1928 | spectra_subsetting
⠏ | 1930 | spectra_subsetting
⠹ | 1933 | spectra_subsetting
⠴ | 1936 | spectra_subsetting
⠇ | 1939 | spectra_subsetting
⠙ | 1942 | spectra_subsetting
⠼ | 1945 | spectra_subsetting
⠧ | 1948 | spectra_subsetting
⠋ | 1951 | spectra_subsetting
⠸ | 1954 | spectra_subsetting
⠦ | 1957 | spectra_subsetting
⠏ | 1960 | spectra_subsetting
⠹ | 1963 | spectra_subsetting
⠴ | 1966 | spectra_subsetting
⠇ | 1969 | spectra_subsetting
⠙ | 1972 | spectra_subsetting
⠼ | 1975 | spectra_subsetting
⠧ | 1978 | spectra_subsetting
⠋ | 1981 | spectra_subsetting
⠸ | 1984 | spectra_subsetting
⠦ | 1987 | spectra_subsetting
⠇ | 1989 | spectra_subsetting
⠋ | 1991 | spectra_subsetting
⠸ | 1994 | spectra_subsetting
⠦ | 1997 | spectra_subsetting
⠏ | 2000 | spectra_subsetting
⠹ | 2003 | spectra_subsetting
⠴ | 2006 | spectra_subsetting
⠇ | 2009 | spectra_subsetting
⠙ | 2012 | spectra_subsetting
⠼ | 2015 | spectra_subsetting
⠧ | 2018 | spectra_subsetting
⠋ | 2021 | spectra_subsetting
⠹ | 2023 | spectra_subsetting
⠴ | 2026 | spectra_subsetting
⠇ | 2029 | spectra_subsetting
⠙ | 2032 | spectra_subsetting
⠼ | 2035 | spectra_subsetting
⠧ | 2038 | spectra_subsetting
⠏ | 2040 | spectra_subsetting
⠹ | 2043 | spectra_subsetting
⠴ | 2046 | spectra_subsetting
⠇ | 2049 | spectra_subsetting
⠙ | 2052 | spectra_subsetting
⠼ | 2055 | spectra_subsetting
⠧ | 2058 | spectra_subsetting
⠋ | 2061 | spectra_subsetting
⠸ | 2064 | spectra_subsetting
⠴ | 2066 | spectra_subsetting
⠇ | 2069 | spectra_subsetting
⠋ | 2071 | spectra_subsetting
⠸ | 2074 | spectra_subsetting
⠦ | 2077 | spectra_subsetting
⠏ | 2080 | spectra_subsetting
⠹ | 2083 | spectra_subsetting
⠴ | 2086 | spectra_subsetting
⠇ | 2089 | spectra_subsetting
⠋ | 2091 | spectra_subsetting
⠸ | 2094 | spectra_subsetting
⠦ | 2097 | spectra_subsetting
⠏ | 2100 | spectra_subsetting
⠙ | 2102 | spectra_subsetting
⠸ | 2104 | spectra_subsetting
⠦ | 2107 | spectra_subsetting
⠏ | 2110 | spectra_subsetting
⠙ | 2112 | spectra_subsetting
⠼ | 2115 | spectra_subsetting
⠦ | 2117 | spectra_subsetting
⠏ | 2120 | spectra_subsetting
⠹ | 2123 | spectra_subsetting
⠼ | 2125 | spectra_subsetting
⠧ | 2128 | spectra_subsetting
⠏ | 2130 | spectra_subsetting
⠹ | 2133 | spectra_subsetting
⠴ | 2136 | spectra_subsetting
⠧ | 2138 | spectra_subsetting
⠋ | 2141 | spectra_subsetting
⠸ | 2144 | spectra_subsetting
⠦ | 2147 | spectra_subsetting
⠏ | 2150 | spectra_subsetting
⠹ | 2153 | spectra_subsetting
⠴ | 2156 | spectra_subsetting
⠇ | 2159 | spectra_subsetting
⠙ | 2162 | spectra_subsetting
⠼ | 2165 | spectra_subsetting
⠧ | 2168 | spectra_subsetting
⠋ | 2171 | spectra_subsetting
⠸ | 2174 | spectra_subsetting
⠦ | 2177 | spectra_subsetting
⠏ | 2180 | spectra_subsetting
⠹ | 2183 | spectra_subsetting
⠴ | 2186 | spectra_subsetting
⠇ | 2189 | spectra_subsetting
⠙ | 2192 | spectra_subsetting
⠼ | 2195 | spectra_subsetting
⠧ | 2198 | spectra_subsetting
⠋ | 2201 | spectra_subsetting
⠸ | 2204 | spectra_subsetting
⠦ | 2207 | spectra_subsetting
⠏ | 2210 | spectra_subsetting
⠹ | 2213 | spectra_subsetting
⠴ | 2216 | spectra_subsetting
⠇ | 2219 | spectra_subsetting
⠙ | 2222 | spectra_subsetting
⠼ | 2225 | spectra_subsetting
⠧ | 2228 | spectra_subsetting
⠋ | 2231 | spectra_subsetting
⠸ | 2234 | spectra_subsetting
⠦ | 2237 | spectra_subsetting
⠏ | 2240 | spectra_subsetting
⠹ | 2243 | spectra_subsetting
⠴ | 2246 | spectra_subsetting
⠇ | 2249 | spectra_subsetting
⠙ | 2252 | spectra_subsetting
⠼ | 2255 | spectra_subsetting
⠧ | 2258 | spectra_subsetting
⠋ | 2261 | spectra_subsetting
⠸ | 2264 | spectra_subsetting
⠦ | 2267 | spectra_subsetting
⠏ | 2270 | spectra_subsetting
⠹ | 2273 | spectra_subsetting
⠴ | 2276 | spectra_subsetting
⠇ | 2279 | spectra_subsetting
⠙ | 2282 | spectra_subsetting
⠼ | 2285 | spectra_subsetting
⠧ | 2288 | spectra_subsetting
⠋ | 2291 | spectra_subsetting
⠸ | 2294 | spectra_subsetting
⠦ | 2297 | spectra_subsetting
⠏ | 2300 | spectra_subsetting
⠼ | 2305 | spectra_subsetting
⠼ | 2315 | spectra_subsetting
✔ | 2317 | spectra_subsetting [41.5s]
⠏ | 0 | spectra_variables
⠙ | 12 | spectra_variables
⠸ | 14 | spectra_variables
⠴ | 16 | spectra_variables
⠦ | 27 | spectra_variables
⠇ | 29 | spectra_variables
⠋ | 31 | spectra_variables
⠹ | 43 | spectra_variables
✔ | 1 62 | spectra_variables [14.5s]
══ Results ═════════════════════════════════════════════════════════════════════
Duration: 60.1 s
── Skipped tests (1) ───────────────────────────────────────────────────────────
• empty test (1): 'test_spectra_variables.R:262:1'
[ FAIL 0 | WARN 0 | SKIP 1 | PASS 2383 ]
>
> proc.time()
user system elapsed
88.864 4.777 91.377
MsBackendRawFileReader.Rcheck/MsBackendRawFileReader-Ex.timings
| name | user | system | elapsed | |
| MsBackendRawFileReader-class | 3.369 | 0.432 | 3.582 | |
| MsBackendRawFileReader | 7.716 | 1.709 | 8.518 | |
| hidden_aliases | 2.340 | 0.525 | 2.591 | |
| ioBenchmark | 46.264 | 4.001 | 12.129 | |