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INSTALL report for pdInfoBuilder on malbec2

This page was generated on 2019-04-09 11:25:15 -0400 (Tue, 09 Apr 2019).

Package 1168/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
pdInfoBuilder 1.47.1
Benilton Carvalho
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/pdInfoBuilder
Branch: master
Last Commit: d94f871
Last Changed Date: 2018-11-18 20:48:36 -0400 (Sun, 18 Nov 2018)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: pdInfoBuilder
Version: 1.47.1
Command: /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL pdInfoBuilder
StartedAt: 2019-04-08 18:27:16 -0400 (Mon, 08 Apr 2019)
EndedAt: 2019-04-08 18:28:01 -0400 (Mon, 08 Apr 2019)
EllapsedTime: 44.9 seconds
RetCode: 0
Status:  OK 

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.9-bioc/R/bin/R CMD INSTALL pdInfoBuilder
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* installing to library ‘/home/biocbuild/bbs-3.9-bioc/R/library’
* installing *source* package ‘pdInfoBuilder’ ...
** using staged installation
** libs
gcc -I"/home/biocbuild/bbs-3.9-bioc/R/include" -DNDEBUG   -I/usr/local/include  -fpic  -g -O2  -Wall -c pdInfoBuilder.c -o pdInfoBuilder.o
gcc -shared -L/home/biocbuild/bbs-3.9-bioc/R/lib -L/usr/local/lib -o pdInfoBuilder.so pdInfoBuilder.o -L/home/biocbuild/bbs-3.9-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.9-bioc/R/library/00LOCK-pdInfoBuilder/00new/pdInfoBuilder/libs
** R
** inst
** byte-compile and prepare package for lazy loading
No methods found in package ‘RSQLite’ for request: ‘dbGetQuery’ when loading ‘pdInfoBuilder’
** help
*** installing help indices
** building package indices
** installing vignettes
   ‘BuildingPDInfoPkgs.Rnw’ 
   ‘howto-AffymetrixMapping.Rnw’ 
** testing if installed package can be loaded from temporary location
No methods found in package ‘RSQLite’ for request: ‘dbGetQuery’ when loading ‘pdInfoBuilder’
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
No methods found in package ‘RSQLite’ for request: ‘dbGetQuery’ when loading ‘pdInfoBuilder’
** testing if installed package keeps a record of temporary installation path
* DONE (pdInfoBuilder)