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BUILD BIN report for FamAgg on celaya2

This page was generated on 2019-04-09 13:15:13 -0400 (Tue, 09 Apr 2019).

Package 526/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FamAgg 1.11.5
Johannes Rainer
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/FamAgg
Branch: master
Last Commit: d31e05a
Last Changed Date: 2019-03-26 03:30:39 -0400 (Tue, 26 Mar 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: FamAgg
Version: 1.11.5
Command: rm -rf FamAgg.buildbin-libdir && mkdir FamAgg.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh FamAgg_1.11.5.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R FamAgg.buildbin-libdir
StartedAt: 2019-04-09 07:01:05 -0400 (Tue, 09 Apr 2019)
EndedAt: 2019-04-09 07:01:31 -0400 (Tue, 09 Apr 2019)
EllapsedTime: 26.1 seconds
RetCode: 0
Status:  OK 
PackageFile: FamAgg_1.11.5.tgz
PackageFileSize: 2.594 MiB

Command output

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### Running command:
###
###   rm -rf FamAgg.buildbin-libdir && mkdir FamAgg.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh FamAgg_1.11.5.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R FamAgg.buildbin-libdir
###
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=FamAgg.buildbin-libdir FamAgg_1.11.5.tar.gz'
>>>>>>> 

* installing *source* package ‘FamAgg’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for ‘pedigree’ in package ‘FamAgg’
in method for ‘countGenerations’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘countGenerations’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘estimateGenerations’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘estimateGenerations’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘findFounders’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘findFounders’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘generationsFrom’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘generationsFrom’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getAncestors’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getAncestors’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getChildren’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getChildren’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getCommonAncestor’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getCommonAncestor’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getMissingMate’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getMissingMate’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getSiblings’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getSiblings’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getAll’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getAll’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getExternalMatched’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getExternalMatched’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getGenerationMatched’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getGenerationMatched’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getGenerationSexMatched’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getGenerationSexMatched’ with signature ‘"pedigree"’: no definition for class “pedigree”
in method for ‘getSexMatched’ with signature ‘"pedigreeList"’: no definition for class “pedigreeList”
in method for ‘getSexMatched’ with signature ‘"pedigree"’: no definition for class “pedigree”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (FamAgg)