Douglas H Phanstiel
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/Sushi |
| Branch: RELEASE_3_6 |
| Last Commit: db3ef21 |
| Last Changed Date: 2017-10-30 12:40:14 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:24:08 -0400 (Thu, 12 Apr 2018).
| Package 1369/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| Sushi 1.16.0 Douglas H Phanstiel
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: Sushi |
| Version: 1.16.0 |
| Command: rm -rf Sushi.buildbin-libdir && mkdir Sushi.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/Sushi_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=Sushi.buildbin-libdir --merge-multiarch Sushi_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL Sushi_1.16.0.zip && rm Sushi_1.16.0.tar.gz Sushi_1.16.0.zip |
| StartedAt: 2018-04-11 18:37:17 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:38:38 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 80.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf Sushi.buildbin-libdir && mkdir Sushi.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/Sushi_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=Sushi.buildbin-libdir --merge-multiarch Sushi_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL Sushi_1.16.0.zip && rm Sushi_1.16.0.tar.gz Sushi_1.16.0.zip
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install for i386
* installing *source* package 'Sushi' ...
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
converting help for package 'Sushi'
finding HTML links ... done
SushiColors html
Sushi_5C.bedpe html
Sushi_ChIAPET_pol2.bedpe html
Sushi_ChIPExo_CTCF.bedgraph html
Sushi_ChIPSeq_CTCF.bedgraph html
Sushi_ChIPSeq_pol2.bed html
Sushi_ChIPSeq_pol2.bedgraph html
Sushi_ChIPSeq_severalfactors.bed html
Sushi_DNaseI.bedgraph html
Sushi_GWAS.bed html
Sushi_HiC.matrix html
Sushi_RNASeq_K562.bedgraph html
Sushi_genes.bed html
Sushi_hg18_genome html
Sushi_transcripts.bed html
addlegend html
chromOffsets html
convertstrandinfo html
labelgenome html
labelplot html
maptocolors html
maptolwd html
opaque html
plotBed html
plotBedgraph html
plotBedpe html
plotGenes html
finding level-2 HTML links ... done
plotHic html
plotManhattan html
sortChrom html
zoombox html
zoomsregion html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'Sushi' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Sushi' as Sushi_1.16.0.zip
* DONE (Sushi)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'Sushi' successfully unpacked and MD5 sums checked
In R CMD INSTALL