Sushi

DOI: 10.18129/B9.bioc.Sushi    

Tools for visualizing genomics data

Bioconductor version: Release (3.6)

Flexible, quantitative, and integrative genomic visualizations for publication-quality multi-panel figures

Author: Douglas H Phanstiel <dphansti at stanford.edu>

Maintainer: Douglas H Phanstiel <dphansti at stanford.edu>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Sushi")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Sushi")

 

PDF	R Script	Sushi
PDF		Reference Manual
Text		NEWS

Details

biocViews	DataRepresentation, Genetics, HiC, Infrastructure, Sequencing, Software, Visualization
Version	1.16.0
In Bioconductor since	BioC 2.14 (R-3.1) (4 years)
License	GPL (>= 2)
Depends	R (>= 2.10), zoo, biomaRt
Imports	graphics, grDevices
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	diffloop
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Sushi_1.16.0.tar.gz
Windows Binary	Sushi_1.16.0.zip
Mac OS X 10.11 (El Capitan)	Sushi_1.16.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Sushi
Package Short Url	http://bioconductor.org/packages/Sushi/
Package Downloads Report	Download Stats