Hervé Pagès
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/DelayedArray |
| Branch: RELEASE_3_6 |
| Last Commit: ffe932e |
| Last Changed Date: 2017-11-01 17:13:55 -0400 (Wed, 01 Nov 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:29:06 -0400 (Thu, 12 Apr 2018).
| Package 348/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| DelayedArray 0.4.1 Hervé Pagès
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | |
| Package: DelayedArray |
| Version: 0.4.1 |
| Command: rm -rf DelayedArray.buildbin-libdir && mkdir DelayedArray.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/DelayedArray_0.4.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=DelayedArray.buildbin-libdir --merge-multiarch DelayedArray_0.4.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL DelayedArray_0.4.1.zip && rm DelayedArray_0.4.1.tar.gz DelayedArray_0.4.1.zip |
| StartedAt: 2018-04-11 18:20:35 -0400 (Wed, 11 Apr 2018) |
| EndedAt: 2018-04-11 18:21:58 -0400 (Wed, 11 Apr 2018) |
| EllapsedTime: 82.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### rm -rf DelayedArray.buildbin-libdir && mkdir DelayedArray.buildbin-libdir && C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.6/bioc/src/contrib/DelayedArray_0.4.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL --build --library=DelayedArray.buildbin-libdir --merge-multiarch DelayedArray_0.4.1.tar.gz && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD INSTALL DelayedArray_0.4.1.zip && rm DelayedArray_0.4.1.tar.gz DelayedArray_0.4.1.zip
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install for i386
* installing *source* package 'DelayedArray' ...
** R
** inst
** preparing package for lazy loading
in method for 'coerce' with signature '"DelayedMatrix","dgCMatrix"': no definition for class "dgCMatrix"
in method for 'coerce' with signature '"DelayedMatrix","sparseMatrix"': no definition for class "sparseMatrix"
Creating a new generic function for 'apply' in package 'DelayedArray'
Creating a generic function for 'dbinom' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'pbinom' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'qbinom' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'dpois' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'ppois' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'qpois' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'dlogis' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'plogis' from package 'stats' in package 'DelayedArray'
Creating a generic function for 'qlogis' from package 'stats' in package 'DelayedArray'
Creating a new generic function for 'rowMaxs' in package 'DelayedArray'
Creating a new generic function for 'colMaxs' in package 'DelayedArray'
Creating a new generic function for 'rowMins' in package 'DelayedArray'
Creating a new generic function for 'colMins' in package 'DelayedArray'
Creating a new generic function for 'rowRanges' in package 'DelayedArray'
Creating a new generic function for 'colRanges' in package 'DelayedArray'
** help
*** installing help indices
converting help for package 'DelayedArray'
finding HTML links ... done
Array-class html
ArrayGrid-class html
DelayedArray-class html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-class.Rd:118: missing file link 'HDF5Array'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-class.Rd:200: missing file link 'HDF5Array'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-class.Rd:202: missing file link 'DataFrame'
DelayedArray-utils html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-utils.Rd:88: missing file link 'Ops'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-utils.Rd:89: missing file link 'Math'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-utils.Rd:89: missing file link 'Math2'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-utils.Rd:100: missing file link 'Summary'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-utils.Rd:114: missing file link 'is.na'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-utils.Rd:114: missing file link '!'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-utils.Rd:116: missing file link '%*%'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-utils.Rd:119: missing file link 'rowSums'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-utils.Rd:120: missing file link 'rowMaxs'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-utils.Rd:133: missing file link 'HDF5Array'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-utils.Rd:136: missing file link 'Ops'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-utils.Rd:137: missing file link 'Math'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/DelayedArray-utils.Rd:137: missing file link 'Math2'
RleArray-class html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/RleArray-class.Rd:65: missing file link 'Rle'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/RleArray-class.Rd:88: missing file link 'Rle'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/RleArray-class.Rd:98: missing file link 'HDF5Array'
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/RleArray-class.Rd:100: missing file link 'DataFrame'
bind-arrays html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/bind-arrays.Rd:40: missing file link 'rbind'
block_processing html
realize html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/realize.Rd:79: missing file link 'HDF5Array'
subset_seed_as_array html
Rd warning: C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu2MfHx/R.INSTALLcc83ccc7496/DelayedArray/man/subset_seed_as_array.Rd:51: missing file link 'DataFrame'
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'DelayedArray' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'DelayedArray' as DelayedArray_0.4.1.zip
* DONE (DelayedArray)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.6-bioc/R/library'
package 'DelayedArray' successfully unpacked and MD5 sums checked
In R CMD INSTALL