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BioC 3.6: BUILD report for CytoML on tokay1

This page was generated on 2017-08-16 13:36:33 -0400 (Wed, 16 Aug 2017).

Package 313/1410HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CytoML 1.3.1
Mike Jiang
Snapshot Date: 2017-08-15 17:18:21 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/CytoML
Last Changed Rev: 131208 / Revision: 131943
Last Changed Date: 2017-07-13 13:23:39 -0400 (Thu, 13 Jul 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  NotNeeded [ ERROR ] skipped  skipped 
veracruz1 OS X 10.11.6 El Capitan / x86_64  NotNeeded  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: CytoML
Version: 1.3.1
Command: chmod a+r CytoML -R && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data CytoML
StartedAt: 2017-08-15 20:56:48 -0400 (Tue, 15 Aug 2017)
EndedAt: 2017-08-15 21:05:57 -0400 (Tue, 15 Aug 2017)
EllapsedTime: 549.6 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r CytoML -R && C:\Users\biocbuild\bbs-3.6-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data CytoML
###
##############################################################################
##############################################################################


* checking for file 'CytoML/DESCRIPTION' ... OK
* preparing 'CytoML':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
Warning: running command '"C:/Users/biocbuild/bbs-3.6-bioc/R/bin/x64/Rcmd.exe" INSTALL -l "C:\Users\biocbuild\bbs-3.6-bioc\tmpdir\Rtmpu07Kfr\Rinst1d68798c128" --no-multiarch "C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu07Kfr/Rbuild1d68603e7fd9/CytoML"' had status 1
      -----------------------------------
* installing *source* package 'CytoML' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -DROUT -IC:/libxml2//x64/include/libxml2 -IC:/protobuf//x64/include -DLIBXML_STATIC -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include" -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/BH/include" -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/RProtoBufLib/include"   -I"C:/local323/include"     -O2 -Wall  -mtune=core2 -c RcppExports.cpp -o RcppExports.o
In file included from C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/POPINDICES.hpp:15:0,
                 from C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/nodeProperties.hpp:11,
                 from C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/populationTree.hpp:11,
                 from C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/GatingHierarchy.hpp:13,
                 from C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/GatingSet.hpp:12,
                 from CytoML_types.h:1,
                 from RcppExports.cpp:4:
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/gate.hpp: In constructor 'CurlyGuadGate::CurlyGuadGate(paramPoly, QUAD)':
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/gate.hpp:438:7: warning: 'CurlyGuadGate::quadrant' will be initialized after [-Wreorder]
  QUAD quadrant;
       ^
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/gate.hpp:437:7: warning:   'bool CurlyGuadGate::interpolated' [-Wreorder]
  bool interpolated;
       ^
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/gate.hpp:440:2: warning:   when initialized here [-Wreorder]
  CurlyGuadGate(paramPoly _inter, QUAD _quad):polygonGate(),quadrant(_quad),interpolated(false){
  ^
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/include" -DNDEBUG -DROUT -IC:/libxml2//x64/include/libxml2 -IC:/protobuf//x64/include -DLIBXML_STATIC -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include" -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/BH/include" -I"C:/Users/biocbuild/bbs-3.6-bioc/R/library/RProtoBufLib/include"   -I"C:/local323/include"     -O2 -Wall  -mtune=core2 -c setCounts.cpp -o setCounts.o
In file included from C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/POPINDICES.hpp:15:0,
                 from C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/nodeProperties.hpp:11,
                 from C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/populationTree.hpp:11,
                 from C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/GatingHierarchy.hpp:13,
                 from C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/GatingSet.hpp:12,
                 from setCounts.cpp:2:
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/gate.hpp: In constructor 'CurlyGuadGate::CurlyGuadGate(paramPoly, QUAD)':
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/gate.hpp:438:7: warning: 'CurlyGuadGate::quadrant' will be initialized after [-Wreorder]
  QUAD quadrant;
       ^
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/gate.hpp:437:7: warning:   'bool CurlyGuadGate::interpolated' [-Wreorder]
  bool interpolated;
       ^
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/include/flowWorkspace/gate.hpp:440:2: warning:   when initialized here [-Wreorder]
  CurlyGuadGate(paramPoly _inter, QUAD _quad):polygonGate(),quadrant(_quad),interpolated(false){
  ^
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o CytoML.dll tmp.def RcppExports.o setCounts.o C:/libxml2//x64/lib/libxml2.a C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a C:/Users/biocbuild/bbs-3.6-bioc/R/library/RProtoBufLib/lib/x64/libprotobuf.a C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowCore/lib/x64/libboost_regex.a -lws2_32 -LC:/local323/lib/x64 -LC:/local323/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.6-B/R/bin/x64 -lR
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(GatingSet.o):GatingSet.cpp:(.text+0x96c): undefined reference to `xmlCheckVersion'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(GatingSet.o):GatingSet.cpp:(.text+0x97e): undefined reference to `xmlReadFile'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(GatingSet.o):GatingSet.cpp:(.text+0x992): undefined reference to `xmlDocGetRootElement'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(GatingSet.o):GatingSet.cpp:(.text+0x9ab): undefined reference to `xmlStrEqual'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(GatingSet.o):GatingSet.cpp:(.text$_Z9getSampleI9workspaceE12wsSampleNodeRT_Ss[_Z9getSampleI9workspaceE12wsSampleNodeRT_Ss]+0x50): undefined reference to `xmlDocGetRootElement'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(GatingSet.o):GatingSet.cpp:(.text$_Z9getSampleI9workspaceE12wsSampleNodeRT_Ss[_Z9getSampleI9workspaceE12wsSampleNodeRT_Ss]+0xab): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(GatingSet.o):GatingSet.cpp:(.text$_Z9getSampleI9workspaceE12wsSampleNodeRT_Ss[_Z9getSampleI9workspaceE12wsSampleNodeRT_Ss]+0x112): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0xa4c): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0xcb6): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x1139): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x28dd): more undefined references to `xmlXPathFreeObject' follow
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x30d3): undefined reference to `xmlXPathNewContext'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x30f8): undefined reference to `xmlXPathEval'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x4151): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x416b): undefined reference to `xmlXPathFreeContext'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x6538): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x6973): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x69c5): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x69d8): undefined reference to `xmlStrEqual'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x6a32): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x6a5b): undefined reference to `xmlStrEqual'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x6bfb): undefined reference to `xmlStrEqual'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x6ceb): undefined reference to `xmlStrEqual'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(macFlowJoWorkspace.o):macFlowJoWorkspace.cpp:(.text+0x6d40): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x694): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x866): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x968): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0xb29): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0xb31): more undefined references to `xmlXPathFreeObject' follow
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x41bc): undefined reference to `xmlXPathNewContext'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x41cf): undefined reference to `xmlXPathEval'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x4b96): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x4b9e): undefined reference to `xmlXPathFreeContext'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x4d3c): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x4f85): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x5360): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x5385): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x5392): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x6095): more undefined references to `xmlXPathFreeObject' follow
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x8bc5): undefined reference to `xmlStrEqual'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x8c47): undefined reference to `xmlStrEqual'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x8cee): undefined reference to `xmlStrEqual'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(winFlowJoWorkspace.o):winFlowJoWorkspace.cpp:(.text+0x8d48): undefined reference to `xmlStrEqual'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(workspace.o):workspace.cpp:(.text+0x19d): undefined reference to `xmlFreeDoc'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(workspace.o):workspace.cpp:(.text+0x1aa): undefined reference to `xmlCleanupParser'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(wsNode.o):wsNode.cpp:(.text+0x1f5): undefined reference to `xmlXPathNewContext'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(wsNode.o):wsNode.cpp:(.text+0x20a): undefined reference to `xmlXPathEval'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(wsNode.o):wsNode.cpp:(.text+0x215): undefined reference to `xmlXPathFreeContext'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(wsNode.o):wsNode.cpp:(.text+0x242): undefined reference to `xmlXPathNewContext'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(wsNode.o):wsNode.cpp:(.text+0x250): undefined reference to `xmlXPathEval'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(wsNode.o):wsNode.cpp:(.text+0x25b): undefined reference to `xmlXPathFreeContext'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(wsNode.o):wsNode.cpp:(.text+0x29f): undefined reference to `xmlGetNsProp'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(wsNode.o):wsNode.cpp:(.text+0x329): undefined reference to `xmlGetProp'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(wsNode.o):wsNode.cpp:(.text+0x3b1): undefined reference to `xmlNodeListGetString'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(wsNode.o):wsNode.cpp:(.rdata$.refptr.xmlFree[.refptr.xmlFree]+0x0): undefined reference to `xmlFree'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x53f): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x5f1): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x7a5): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x901): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0xa5f): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0xf8d): more undefined references to `xmlXPathFreeObject' follow
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x2405): undefined reference to `xmlXPathNewContext'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x2416): undefined reference to `xmlXPathEval'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x246c): undefined reference to `xmlXPathEval'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x250a): undefined reference to `xmlGetProp'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x2586): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x2590): undefined reference to `xmlXPathFreeContext'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x259a): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x25c0): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x25ca): undefined reference to `xmlXPathFreeContext'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x2677): undefined reference to `xmlXPathFreeObject'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x2681): undefined reference to `xmlXPathFreeContext'
C:/Users/biocbuild/bbs-3.6-bioc/R/library/flowWorkspace/lib/x64/libflowWorkspace.a(flowJoWorkspace.o):flowJoWorkspace.cpp:(.text+0x27e4): undefined reference to `xmlXPathFreeObject'
collect2.exe: error: ld returned 1 exit status
no DLL was created
ERROR: compilation failed for package 'CytoML'
* removing 'C:/Users/biocbuild/bbs-3.6-bioc/tmpdir/Rtmpu07Kfr/Rinst1d68798c128/CytoML'
      -----------------------------------
ERROR: package installation failed