Bioconductor version: Release (3.6)
This package is designed to use GatingML2.0 as the standard format to exchange the gated data with other software platform.
Author: Mike Jiang
Maintainer: Mike Jiang <wjiang2 at fhcrc.org>
Citation (from within R,
enter citation("CytoML")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("CytoML")
HTML | R Script | How to export a GatingSet to GatingML |
HTML | R Script | How to parse gatingML into a GatingSet |
Reference Manual | ||
Text | NEWS |
biocViews | DataImport, DataRepresentation, FlowCytometry, Software |
Version | 1.4.1 |
In Bioconductor since | BioC 3.4 (R-3.3) (1.5 years) |
License | Artistic-2.0 |
Depends | |
Imports | flowCore(>= 1.43.10), flowWorkspace(>= 3.25.16), openCyto(>= 1.11.3), XML, data.table, flowUtils(>= 1.35.7), jsonlite, RBGL, ncdfFlow, Rgraphviz, Biobase, methods, graph, graphics, utils, base64enc, plyr, ggcyto(>= 1.5.4) |
LinkingTo | |
Suggests | testthat, flowWorkspaceData(>= 2.11.1), knitr |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | CytoML_1.4.1.tar.gz |
Windows Binary | CytoML_1.4.1.zip |
Mac OS X 10.11 (El Capitan) | CytoML_1.4.1.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/CytoML |
Package Short Url | http://bioconductor.org/packages/CytoML/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.6 | Source Archive |
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