Back to Mac ARM64 build report for BioC 3.16
ABCDEFGHIJKLMNOPQRSTU[V]WXYZ

This page was generated on 2023-04-19 11:01:59 -0400 (Wed, 19 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnsonmacOS 13.0 Venturaarm644.2.2 (2022-10-31) -- "Innocent and Trusting" 4256
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for variancePartition on kjohnson


To the developers/maintainers of the variancePartition package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2132/2183HostnameOS / ArchINSTALLBUILDBUILD BIN
variancePartition 1.28.9  (landing page)
Gabriel E. Hoffman
Snapshot Date: 2023-04-12 13:00:02 -0400 (Wed, 12 Apr 2023)
git_url: https://git.bioconductor.org/packages/variancePartition
git_branch: RELEASE_3_16
git_last_commit: 5b17a04
git_last_commit_date: 2023-03-15 20:27:05 -0400 (Wed, 15 Mar 2023)
kjohnsonmacOS 13.0 Ventura / arm64  OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: variancePartition
Version: 1.28.9
Command: rm -rf variancePartition.buildbin-libdir && mkdir variancePartition.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh variancePartition_1.28.9.tar.gz /Library/Frameworks/R.framework/Resources/bin/R variancePartition.buildbin-libdir
StartedAt: 2023-04-18 20:23:02 -0400 (Tue, 18 Apr 2023)
EndedAt: 2023-04-18 20:23:33 -0400 (Tue, 18 Apr 2023)
EllapsedTime: 30.4 seconds
RetCode: 0
Status:   OK  
PackageFile: variancePartition_1.28.9.tgz
PackageFileSize: 3.833 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf variancePartition.buildbin-libdir && mkdir variancePartition.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh variancePartition_1.28.9.tar.gz /Library/Frameworks/R.framework/Resources/bin/R variancePartition.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=variancePartition.buildbin-libdir variancePartition_1.28.9.tar.gz'
>>>>>>> 

* installing *source* package ‘variancePartition’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for ‘calcVarPart’ with signature ‘"negbin"’: no definition for class “negbin”
in method for ‘checkModelStatus’ with signature ‘"negbin"’: no definition for class “negbin”
Creating a new generic function for ‘classifyTestsF’ in package ‘variancePartition’
Creating a new generic function for ‘topTable’ in package ‘variancePartition’
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (variancePartition)