Back to Mac ARM64 build report for BioC 3.16
ABCDEFGHIJKLMNOPQR[S]TUVWXYZ

This page was generated on 2023-04-19 11:01:58 -0400 (Wed, 19 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnsonmacOS 13.0 Venturaarm644.2.2 (2022-10-31) -- "Innocent and Trusting" 4256
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for scAlign on kjohnson


To the developers/maintainers of the scAlign package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1775/2183HostnameOS / ArchINSTALLBUILDBUILD BIN
scAlign 1.12.0  (landing page)
Nelson Johansen
Snapshot Date: 2023-04-12 13:00:02 -0400 (Wed, 12 Apr 2023)
git_url: https://git.bioconductor.org/packages/scAlign
git_branch: RELEASE_3_16
git_last_commit: b875098
git_last_commit_date: 2022-11-01 11:19:42 -0400 (Tue, 01 Nov 2022)
kjohnsonmacOS 13.0 Ventura / arm64  OK    ERROR  skipped

Summary

Package: scAlign
Version: 1.12.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data scAlign
StartedAt: 2023-04-18 03:39:32 -0400 (Tue, 18 Apr 2023)
EndedAt: 2023-04-18 03:44:02 -0400 (Tue, 18 Apr 2023)
EllapsedTime: 270.4 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data scAlign
###
##############################################################################
##############################################################################


* checking for file ‘scAlign/DESCRIPTION’ ... OK
* preparing ‘scAlign’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘scAlign.Rmd’ using rmarkdown

  |                                                                            
  |                                                                      |   0%
  |                                                                            
  |===================================                                   |  50%
  |                                                                            
  |======================================================================| 100%

  |                                                                            
  |                                                                      |   0%
  |                                                                            
  |===================================                                   |  50%
  |                                                                            
  |======================================================================| 100%
Quitting from lines 115-159 (scAlign.Rmd) 
Error: processing vignette 'scAlign.Rmd' failed with diagnostics:
Error with system install of tensorflow, check R for Tensorflow docs.
--- failed re-building ‘scAlign.Rmd’

SUMMARY: processing the following file failed:
  ‘scAlign.Rmd’

Error: Vignette re-building failed.
Execution halted