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This page was generated on 2023-04-19 11:01:59 -0400 (Wed, 19 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnsonmacOS 13.0 Venturaarm644.2.2 (2022-10-31) -- "Innocent and Trusting" 4256
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for TCGAutils on kjohnson


To the developers/maintainers of the TCGAutils package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2029/2183HostnameOS / ArchINSTALLBUILDBUILD BIN
TCGAutils 1.18.0  (landing page)
Marcel Ramos
Snapshot Date: 2023-04-12 13:00:02 -0400 (Wed, 12 Apr 2023)
git_url: https://git.bioconductor.org/packages/TCGAutils
git_branch: RELEASE_3_16
git_last_commit: 04f65bf
git_last_commit_date: 2022-11-01 11:17:46 -0400 (Tue, 01 Nov 2022)
kjohnsonmacOS 13.0 Ventura / arm64  OK    ERROR  skipped

Summary

Package: TCGAutils
Version: 1.18.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data TCGAutils
StartedAt: 2023-04-18 10:22:09 -0400 (Tue, 18 Apr 2023)
EndedAt: 2023-04-18 10:23:53 -0400 (Tue, 18 Apr 2023)
EllapsedTime: 103.8 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data TCGAutils
###
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* checking for file ‘TCGAutils/DESCRIPTION’ ... OK
* preparing ‘TCGAutils’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘TCGAutils.Rmd’ using rmarkdown
Quitting from lines 71-75 (TCGAutils.Rmd) 
Error: processing vignette 'TCGAutils.Rmd' failed with diagnostics:
HDF5. File accessibility. Unable to open file.
--- failed re-building ‘TCGAutils.Rmd’

SUMMARY: processing the following file failed:
  ‘TCGAutils.Rmd’

Error: Vignette re-building failed.
Execution halted