Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:07:12 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for recount3 on tokay2


To the developers/maintainers of the recount3 package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/recount3.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1566/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
recount3 1.4.0  (landing page)
Leonardo Collado-Torres
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/recount3
git_branch: RELEASE_3_14
git_last_commit: e4612a2
git_last_commit_date: 2021-10-26 13:03:44 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: recount3
Version: 1.4.0
Command: rm -rf recount3.buildbin-libdir && mkdir recount3.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=recount3.buildbin-libdir recount3_1.4.0.tar.gz
StartedAt: 2022-04-13 06:56:38 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 06:57:30 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 51.1 seconds
RetCode: 0
Status:   OK  
PackageFile: recount3_1.4.0.zip
PackageFileSize: 657.3 KiB

Command output

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###
### Running command:
###
###   rm -rf recount3.buildbin-libdir && mkdir recount3.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=recount3.buildbin-libdir recount3_1.4.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'recount3' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'recount3'
    finding HTML links ... done
    annotation_ext                          html  
    annotation_options                      html  
    available_projects                      html  
    available_samples                       html  
    compute_read_counts                     html  
    compute_scale_factors                   html  
    create_hub                              html  
    create_rse                              html  
    create_rse_manual                       html  
    expand_sra_attributes                   html  
    file_retrieve                           html  
    is_paired_end                           html  
    locate_url                              html  
    locate_url_ann                          html  
    project_homes                           html  
    read_counts                             html  
    read_metadata                           html  
    recount3-package                        html  
    recount3_cache                          html  
    recount3_cache_files                    html  
    recount3_cache_rm                       html  
    transform_counts                        html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'recount3' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'recount3' as recount3_1.4.0.zip
* DONE (recount3)