| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:07:17 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the rWikiPathways package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rWikiPathways.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1684/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| rWikiPathways 1.14.0 (landing page) Egon Willighagen
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: rWikiPathways |
| Version: 1.14.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/rWikiPathways_1.14.0.tar.gz && rm -rf rWikiPathways.buildbin-libdir && mkdir rWikiPathways.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rWikiPathways.buildbin-libdir rWikiPathways_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL rWikiPathways_1.14.0.zip && rm rWikiPathways_1.14.0.tar.gz rWikiPathways_1.14.0.zip |
| StartedAt: 2022-04-12 06:02:45 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:06:11 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 206.1 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/rWikiPathways_1.14.0.tar.gz && rm -rf rWikiPathways.buildbin-libdir && mkdir rWikiPathways.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rWikiPathways.buildbin-libdir rWikiPathways_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL rWikiPathways_1.14.0.zip && rm rWikiPathways_1.14.0.tar.gz rWikiPathways_1.14.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
5 9509k 5 492k 0 0 619k 0 0:00:15 --:--:-- 0:00:15 619k
18 9509k 18 1742k 0 0 968k 0 0:00:09 0:00:01 0:00:08 968k
41 9509k 41 3954k 0 0 1418k 0 0:00:06 0:00:02 0:00:04 1418k
74 9509k 74 7059k 0 0 1856k 0 0:00:05 0:00:03 0:00:02 1856k
100 9509k 100 9509k 0 0 2143k 0 0:00:04 0:00:04 --:--:-- 2143k
install for i386
* installing *source* package 'rWikiPathways' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'rWikiPathways'
finding HTML links ... done
downloadPathwayArchive html
findPathwayIdsByLiterature html
findPathwayIdsByText html
findPathwayIdsByXref html
findPathwayNamesByLiterature html
findPathwayNamesByText html
findPathwayNamesByXref html
findPathwayUrlsByLiterature html
findPathwayUrlsByText html
findPathwayUrlsByXref html
findPathwaysByLiterature html
findPathwaysByText html
findPathwaysByXref html
getCurationTagNames html
getCurationTags html
getEveryCurationTag html
getOntologyTermIds html
getOntologyTermNames html
getOntologyTerms html
getPathway html
getPathwayHistory html
getPathwayIdsByCurationTag html
getPathwayIdsByOntologyTerm html
getPathwayIdsByParentOntologyTerm html
getPathwayInfo html
getPathwaysByCurationTag html
getPathwaysByOntologyTerm html
getPathwaysByParentOntologyTerm html
getRecentChanges html
getRecentChangesIds html
getRecentChangesNames html
getXrefList html
listOrganisms html
listPathwayIds html
listPathwayNames html
listPathwayUrls html
listPathways html
readGMT html
readGMTnames html
readPathwayGMT html
wikipathwaysAPI html
wikipathwaysGET html
writeGMT html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'rWikiPathways' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'rWikiPathways' as rWikiPathways_1.14.0.zip
* DONE (rWikiPathways)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'rWikiPathways' successfully unpacked and MD5 sums checked