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This page was generated on 2022-04-13 12:07:09 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for qpgraph on tokay2


To the developers/maintainers of the qpgraph package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/qpgraph.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1499/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
qpgraph 2.28.2  (landing page)
Robert Castelo
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/qpgraph
git_branch: RELEASE_3_14
git_last_commit: b8a47b2
git_last_commit_date: 2022-04-05 03:47:17 -0400 (Tue, 05 Apr 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: qpgraph
Version: 2.28.2
Command: rm -rf qpgraph.buildbin-libdir && mkdir qpgraph.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=qpgraph.buildbin-libdir qpgraph_2.28.2.tar.gz
StartedAt: 2022-04-13 06:53:22 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 06:54:53 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 90.7 seconds
RetCode: 0
Status:   OK  
PackageFile: qpgraph_2.28.2.zip
PackageFileSize: 4.245 MiB

Command output

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###
### Running command:
###
###   rm -rf qpgraph.buildbin-libdir && mkdir qpgraph.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=qpgraph.buildbin-libdir qpgraph_2.28.2.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'qpgraph' ...
** using staged installation

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c cliquer.c -o cliquer.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c graph.c -o graph.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c qpgraph.c -o qpgraph.o
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c reorder.c -o reorder.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o qpgraph.dll tmp.def cliquer.o graph.o qpgraph.o reorder.o -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lRlapack -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lRblas -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/qpgraph.buildbin-libdir/00LOCK-qpgraph/00new/qpgraph/libs/i386
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for 'det' from package 'Matrix' in package 'qpgraph'
** help
*** installing help indices
  converting help for package 'qpgraph'
    finding HTML links ... done
    EcoliOxygen                             html  
    HMgmm-class                             html  
    SsdMatrix-class                         html  
    UGgmm-class                             html  
    eQTLcross-class                         html  
    eQTLnetwork-class                       html  
    eQTLnetworkEstimate                     html  
    eQTLnetworkEstimationParam-class        html  
    filterCollinearities                    html  
    graphParam-class                        html  
    qpAllCItests                            html  
    qpAnyGraph                              html  
    qpAvgNrr                                html  
    qpBoundary                              html  
    qpCItest                                html  
    qpClique                                html  
    qpCliqueNumber                          html  
    qpCov                                   html  
    qpEdgeNrr                               html  
    qpFunctionalCoherence                   html  
    qpG2Sigma                               html  
    qpGenNrr                                html  
    qpGetCliques                            html  
    qpGraph-class                           html  
    qpGraphDensity                          html  
    qpHTF                                   html  
    qpHist                                  html  
    qpIPF                                   html  
    qpImportNrr                             html  
    qpK2ParCor                              html  
    qpNrr                                   html  
    qpPAC                                   html  
    qpPCC                                   html  
    qpPRscoreThreshold                      html  
    qpPathWeight                            html  
    qpPlotMap                               html  
    qpPlotNetwork                           html  
    qpPrecisionRecall                       html  
    qpRndGraph                              html  
    qpRndWishart                            html  
    qpTopPairs                              html  
    qpUnifRndAssociation                    html  
    qpUpdateCliquesRemoving                 html  
    qpgraph-package                         html  
REDIRECT:topic	 Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/qpgraph.buildbin-libdir/00LOCK-qpgraph/00new/qpgraph/help/qpgraph.html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'qpgraph' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c cliquer.c -o cliquer.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c graph.c -o graph.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c qpgraph.c -o qpgraph.o
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c reorder.c -o reorder.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o qpgraph.dll tmp.def cliquer.o graph.o qpgraph.o reorder.o -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lRlapack -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lRblas -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/qpgraph.buildbin-libdir/qpgraph/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'qpgraph' as qpgraph_2.28.2.zip
* DONE (qpgraph)