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This page was generated on 2022-04-13 12:06:47 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for lipidr on tokay2


To the developers/maintainers of the lipidr package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/lipidr.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1003/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
lipidr 2.8.1  (landing page)
Ahmed Mohamed
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/lipidr
git_branch: RELEASE_3_14
git_last_commit: 658506f
git_last_commit_date: 2022-02-14 21:31:19 -0400 (Mon, 14 Feb 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: lipidr
Version: 2.8.1
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/lipidr_2.8.1.tar.gz && rm -rf lipidr.buildbin-libdir && mkdir lipidr.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=lipidr.buildbin-libdir lipidr_2.8.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL lipidr_2.8.1.zip && rm lipidr_2.8.1.tar.gz lipidr_2.8.1.zip
StartedAt: 2022-04-12 06:26:32 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 06:28:27 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 114.9 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/lipidr_2.8.1.tar.gz && rm -rf lipidr.buildbin-libdir && mkdir lipidr.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=lipidr.buildbin-libdir lipidr_2.8.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL lipidr_2.8.1.zip && rm lipidr_2.8.1.tar.gz lipidr_2.8.1.zip
###
##############################################################################
##############################################################################


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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 17 1841k   17  317k    0     0   651k      0  0:00:02 --:--:--  0:00:02  651k
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100 1841k  100 1841k    0     0  1209k      0  0:00:01  0:00:01 --:--:-- 1210k

install for i386

* installing *source* package 'lipidr' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'lipidr'
    finding HTML links ... done
    LipidomicsExperiment-class              html  
    LipidomicsExperiment                    html  
    finding level-2 HTML links ... done

    add_sample_annotation                   html  
    annotate_lipids                         html  
    as_lipidomics_experiment                html  
    data_normalized                         html  
    de_analysis                             html  
    filter_by_cv                            html  
    gen_lipidsets                           html  
    impute_na                               html  
    lipidDefaults                           html  
    lipidnames_pattern                      html  
    lipidr-data                             html  
    lipidr-package                          html  
    lsea                                    html  
    mva                                     html  
    mw                                      html  
    non_parsed_molecules                    html  
    normalize_istd                          html  
    normalize_pqn                           html  
    pipe                                    html  
    plot_chain_distribution                 html  
    plot_heatmap                            html  
    plot_lipidclass                         html  
    plot_molecules                          html  
    plot_samples                            html  
    plot_trend                              html  
    read_skyline                            html  
    remove_non_parsed_molecules             html  
    set_attr                                html  
    summarize_transitions                   html  
    update_molecule_names                   html  
    use_interactive_graphics                html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'lipidr' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'lipidr' as lipidr_2.8.1.zip
* DONE (lipidr)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'lipidr' successfully unpacked and MD5 sums checked