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This page was generated on 2022-04-13 12:07:13 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for RiboDiPA on tokay2


To the developers/maintainers of the RiboDiPA package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RiboDiPA.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1605/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RiboDiPA 1.2.0  (landing page)
Ji-Ping Wang
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/RiboDiPA
git_branch: RELEASE_3_14
git_last_commit: 0b22a63
git_last_commit_date: 2021-10-26 13:06:31 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: RiboDiPA
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RiboDiPA_1.2.0.tar.gz && rm -rf RiboDiPA.buildbin-libdir && mkdir RiboDiPA.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RiboDiPA.buildbin-libdir RiboDiPA_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RiboDiPA_1.2.0.zip && rm RiboDiPA_1.2.0.tar.gz RiboDiPA_1.2.0.zip
StartedAt: 2022-04-12 06:14:23 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 06:16:40 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 136.7 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RiboDiPA_1.2.0.tar.gz && rm -rf RiboDiPA.buildbin-libdir && mkdir RiboDiPA.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RiboDiPA.buildbin-libdir RiboDiPA_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RiboDiPA_1.2.0.zip && rm RiboDiPA_1.2.0.tar.gz RiboDiPA_1.2.0.zip
###
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100  245k  100  245k    0     0   352k      0 --:--:-- --:--:-- --:--:--  352k

install for i386

* installing *source* package 'RiboDiPA' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c centerCPP.cpp -o centerCPP.o
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o RiboDiPA.dll tmp.def RcppExports.o centerCPP.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/RiboDiPA.buildbin-libdir/00LOCK-RiboDiPA/00new/RiboDiPA/libs/i386
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RiboDiPA'
    finding HTML links ... done
    DataBinning                             html  
    PsiteMapping                            html  
    RiboDiPA                                html  
    data.binned                             html  
    data.psite                              html  
    diffPatternTest                         html  
    diffPatternTestExon                     html  
    normFactor                              html  
    plotTest                                html  
    plotTrack                               html  
    psitecal                                html  
    result.pst                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'RiboDiPA' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c centerCPP.cpp -o centerCPP.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o RiboDiPA.dll tmp.def RcppExports.o centerCPP.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/RiboDiPA.buildbin-libdir/RiboDiPA/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RiboDiPA' as RiboDiPA_1.2.0.zip
* DONE (RiboDiPA)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'RiboDiPA' successfully unpacked and MD5 sums checked