Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:08:28 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for OmnipathR on machv2


To the developers/maintainers of the OmnipathR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/OmnipathR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1330/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OmnipathR 3.2.9  (landing page)
Denes Turei
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/OmnipathR
git_branch: RELEASE_3_14
git_last_commit: 127afee
git_last_commit_date: 2022-04-05 19:00:39 -0400 (Tue, 05 Apr 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    ERROR  
tokay2Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: OmnipathR
Version: 3.2.9
Command: rm -rf OmnipathR.buildbin-libdir && mkdir OmnipathR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh OmnipathR_3.2.9.tar.gz /Library/Frameworks/R.framework/Resources/bin/R OmnipathR.buildbin-libdir
StartedAt: 2022-04-12 21:09:55 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 21:10:17 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 22.1 seconds
RetCode: 0
Status:   OK  
PackageFile: OmnipathR_3.2.9.tgz
PackageFileSize: 2.283 MiB

Command output

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###
### Running command:
###
###   rm -rf OmnipathR.buildbin-libdir && mkdir OmnipathR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh OmnipathR_3.2.9.tar.gz /Library/Frameworks/R.framework/Resources/bin/R OmnipathR.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=OmnipathR.buildbin-libdir OmnipathR_3.2.9.tar.gz'
>>>>>>> 

* installing *source* package ‘OmnipathR’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
[2022-04-12 21:10:12] [INFO]    [OmnipathR] Initialized cache: `/Users/biocbuild/Library/Caches/OmnipathR`.
[2022-04-12 21:10:13] [INFO]    [OmnipathR] Welcome to OmnipathR!
[2022-04-12 21:10:13] [TRACE]   [OmnipathR] Cache locked: FALSE
** testing if installed package can be loaded from final location
[2022-04-12 21:10:15] [INFO]    [OmnipathR] Initialized cache: `/Users/biocbuild/Library/Caches/OmnipathR`.
[2022-04-12 21:10:15] [INFO]    [OmnipathR] Welcome to OmnipathR!
[2022-04-12 21:10:15] [TRACE]   [OmnipathR] Cache locked: FALSE
** testing if installed package keeps a record of temporary installation path
* DONE (OmnipathR)