Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:07:02 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for OTUbase on tokay2


To the developers/maintainers of the OTUbase package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/OTUbase.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1355/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OTUbase 1.44.0  (landing page)
Daniel Beck
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/OTUbase
git_branch: RELEASE_3_14
git_last_commit: 3a0915a
git_last_commit_date: 2021-10-26 11:57:04 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: OTUbase
Version: 1.44.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/OTUbase_1.44.0.tar.gz && rm -rf OTUbase.buildbin-libdir && mkdir OTUbase.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OTUbase.buildbin-libdir OTUbase_1.44.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL OTUbase_1.44.0.zip && rm OTUbase_1.44.0.tar.gz OTUbase_1.44.0.zip
StartedAt: 2022-04-12 05:38:19 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 05:40:00 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 100.4 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/OTUbase_1.44.0.tar.gz && rm -rf OTUbase.buildbin-libdir && mkdir OTUbase.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=OTUbase.buildbin-libdir OTUbase_1.44.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL OTUbase_1.44.0.zip && rm OTUbase_1.44.0.tar.gz OTUbase_1.44.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 84703  100 84703    0     0   431k      0 --:--:-- --:--:-- --:--:--  433k

install for i386

* installing *source* package 'OTUbase' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'OTUbase'
    finding HTML links ... done
    OTUbase-package                         html  
    OTUset-class                            html  
    TAXset-class                            html  
    abundance                               html  
    accessors                               html  
    finding level-2 HTML links ... done

    assignmentData                          html  
    clusterSamples                          html  
    other_functions                         html  
    other_generics                          html  
    readOTUset                              html  
    readTAXset                              html  
    sampleData                              html  
    subOTUset                               html  
    subTAXset                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'OTUbase' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'OTUbase' as OTUbase_1.44.0.zip
* DONE (OTUbase)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'OTUbase' successfully unpacked and MD5 sums checked