Back to Multiple platform build/check report for BioC 3.14
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2022-04-13 12:06:52 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for MethReg on tokay2


To the developers/maintainers of the MethReg package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MethReg.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1114/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MethReg 1.4.0  (landing page)
Tiago Silva
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/MethReg
git_branch: RELEASE_3_14
git_last_commit: 4dae66b
git_last_commit_date: 2021-10-26 13:02:56 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: MethReg
Version: 1.4.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/MethReg_1.4.0.tar.gz && rm -rf MethReg.buildbin-libdir && mkdir MethReg.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MethReg.buildbin-libdir MethReg_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL MethReg_1.4.0.zip && rm MethReg_1.4.0.tar.gz MethReg_1.4.0.zip
StartedAt: 2022-04-12 07:22:55 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 07:24:08 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 73.5 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/MethReg_1.4.0.tar.gz && rm -rf MethReg.buildbin-libdir && mkdir MethReg.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MethReg.buildbin-libdir MethReg_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL MethReg_1.4.0.zip && rm MethReg_1.4.0.tar.gz MethReg_1.4.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0 3625k    0 16009    0     0   135k      0  0:00:26 --:--:--  0:00:26  135k
 41 3625k   41 1513k    0     0  1397k      0  0:00:02  0:00:01  0:00:01 1397k
100 3625k  100 3625k    0     0  1835k      0  0:00:01  0:00:01 --:--:-- 1834k

install for i386

* installing *source* package 'MethReg' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MethReg'
    finding HTML links ... done
    MethReg                                 html  
    clinical                                html  
    cor_dnam_target_gene                    html  
    cor_tf_target_gene                      html  
    create_triplet_distance_based           html  
    create_triplet_regulon_based            html  
    dna.met.chr21                           html  
    filter_dnam_by_quant_diff               html  
    filter_exp_by_quant_mean_FC             html  
    filter_genes_zero_expression            html  
    gene.exp.chr21.log2                     html  
    get_human_tfs                           html  
    get_met_probes_info                     html  
    get_promoter_avg                        html  
    get_region_target_gene                  html  
    get_residuals                           html  
    get_tf_ES                               html  
    get_tf_in_region                        html  
    interaction_model                       html  
    make_dnam_se                            html  
    make_exp_se                             html  
    make_granges_from_names                 html  
    make_names_from_granges                 html  
    plot_interaction_model                  html  
    plot_stratified_model                   html  
    stratified_model                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MethReg' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MethReg' as MethReg_1.4.0.zip
* DONE (MethReg)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'MethReg' successfully unpacked and MD5 sums checked