Back to Multiple platform build/check report for BioC 3.14
ABCDE[F]GHIJKLMNOPQRSTUVWXYZ

This page was generated on 2022-04-13 12:06:33 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for FindIT2 on tokay2


To the developers/maintainers of the FindIT2 package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/FindIT2.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 642/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FindIT2 1.0.3  (landing page)
Guandong Shang
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/FindIT2
git_branch: RELEASE_3_14
git_last_commit: e395076
git_last_commit_date: 2021-12-28 22:21:52 -0400 (Tue, 28 Dec 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: FindIT2
Version: 1.0.3
Command: rm -rf FindIT2.buildbin-libdir && mkdir FindIT2.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=FindIT2.buildbin-libdir FindIT2_1.0.3.tar.gz
StartedAt: 2022-04-13 06:12:56 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 06:14:06 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 69.9 seconds
RetCode: 0
Status:   OK  
PackageFile: FindIT2_1.0.3.zip
PackageFileSize: 1.524 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf FindIT2.buildbin-libdir && mkdir FindIT2.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=FindIT2.buildbin-libdir FindIT2_1.0.3.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'FindIT2' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'FindIT2'
    finding HTML links ... done
    ATAC_normCount                          html  
    RNADiff_LEC2_GR                         html  
    RNA_normCount                           html  
    TF_target_database                      html  
    calcRP_TFHit                            html  
    calcRP_coverage                         html  
    calcRP_region                           html  
    enhancerPromoterCor                     html  
    findIT_MARA                             html  
    findIT_TFHit                            html  
    findIT_TTPair                           html  
    findIT_enrichFisher                     html  
    findIT_enrichWilcox                     html  
    findIT_regionRP                         html  
    getAssocPairNumber                      html  
    integrate_ChIP_RNA                      html  
    integrate_replicates                    html  
    jaccard_findIT_TTpair                   html  
    jaccard_findIT_enrichFisher             html  
    loadPeakFile                            html  
    mm_geneBound                            html  
    mm_geneScan                             html  
    mm_nearestGene                          html  
    peakGeneCor                             html  
    plot_annoDistance                       html  
    plot_peakGeneAlias_summary              html  
    plot_peakGeneCor                        html  
    test_featureSet                         html  
    test_geneSet                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'FindIT2' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'FindIT2' as FindIT2_1.0.3.zip
* DONE (FindIT2)