Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:11 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for Autotuner on tokay2


To the developers/maintainers of the Autotuner package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Autotuner.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 100/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Autotuner 1.8.0  (landing page)
Craig McLean
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/Autotuner
git_branch: RELEASE_3_14
git_last_commit: 64c9943
git_last_commit_date: 2021-10-26 12:53:11 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
machv2macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: Autotuner
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/Autotuner_1.8.0.tar.gz && rm -rf Autotuner.buildbin-libdir && mkdir Autotuner.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Autotuner.buildbin-libdir Autotuner_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL Autotuner_1.8.0.zip && rm Autotuner_1.8.0.tar.gz Autotuner_1.8.0.zip
StartedAt: 2022-04-12 05:09:07 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 05:11:14 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 126.8 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/Autotuner_1.8.0.tar.gz && rm -rf Autotuner.buildbin-libdir && mkdir Autotuner.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Autotuner.buildbin-libdir Autotuner_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL Autotuner_1.8.0.zip && rm Autotuner_1.8.0.tar.gz Autotuner_1.8.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 15 3762k   15  585k    0     0  1560k      0  0:00:02 --:--:--  0:00:02 1560k
100 3762k  100 3762k    0     0  2845k      0  0:00:01  0:00:01 --:--:-- 2847k

install for i386

* installing *source* package 'Autotuner' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Autotuner'
    finding HTML links ... done
    Autotuner-class                         html  
    EICparams                               html  
    TIC_params                              html  
    ThresholdingAlgo                        html  
    checkBounds                             html  
    checkEICPeaks                           html  
    createAutotuner                         html  
    dissectScans                            html  
    eicParamsEsts                           html  
    estimatePPM                             html  
    estimateSNThresh                        html  
    extract_peaks                           html  
    filterPeaksfromNoise                    html  
    filterPpmError                          html  
    findPeakWidth                           html  
    findTruePeaks                           html  
    getAutoFactorCol                        html  
    getAutoFile_col                         html  
    getAutoFile_paths                       html  
    getAutoIntensity                        html  
    getAutoMetadata                         html  
    getAutoPeak_difference                  html  
    getAutoPeak_table                       html  
    getAutoPeaks                            html  
    getAutoTime                             html  
    initialize-Autotuner-method             html  
    isolatePeaks                            html  
    mzDb                                    html  
    observedPeak                            html  
    peak_time_difference                    html  
    peakwidth_est                           html  
    peakwidth_table                         html  
    plot_peaks                              html  
    plot_signals                            html  
    returnParams                            html  
    setAutoFactorCol                        html  
    setAutoFile_col                         html  
    setAutoFile_paths                       html  
    setAutoIntensity                        html  
    setAutoMetadata                         html  
    setAutoPeak_difference                  html  
    setAutoPeak_table                       html  
    setAutoPeaks                            html  
    setAutoTime                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Autotuner' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Autotuner' as Autotuner_1.8.0.zip
* DONE (Autotuner)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'Autotuner' successfully unpacked and MD5 sums checked