Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:28:55 -0400 (Thu, 06 May 2021).
To the developers/maintainers of the rqubic package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1577/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
rqubic 1.36.0 (landing page) Jitao David Zhang
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: rqubic |
Version: 1.36.0 |
Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL rqubic |
StartedAt: 2021-05-05 17:09:37 -0400 (Wed, 05 May 2021) |
EndedAt: 2021-05-05 17:09:46 -0400 (Wed, 05 May 2021) |
EllapsedTime: 9.4 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL rqubic ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’ * installing *source* package ‘rqubic’ ... ** using staged installation ** libs gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c bicluster.c -o bicluster.o bicluster.c: In function ‘seed_intersect_r’: bicluster.c:354:11: warning: suggest parentheses around assignment used as truth value [-Wparentheses] if (flag=ss) (*m_cnt)++; ^~~~ gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c discretize.c -o discretize.o In file included from discretize.c:9:0: rqubic.h:62:20: warning: ‘MINCOL_ATT_NAME’ defined but not used [-Wunused-variable] static const char *MINCOL_ATT_NAME="minimumCol"; ^~~~~~~~~~~~~~~ rqubic.h:61:20: warning: ‘EDGELIST_ATT_NAME’ defined but not used [-Wunused-variable] static const char *EDGELIST_ATT_NAME="edgelist"; ^~~~~~~~~~~~~~~~~ gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c fib.c -o fib.o In file included from fib.c:35:0: rqubic.h:62:20: warning: ‘MINCOL_ATT_NAME’ defined but not used [-Wunused-variable] static const char *MINCOL_ATT_NAME="minimumCol"; ^~~~~~~~~~~~~~~ rqubic.h:61:20: warning: ‘EDGELIST_ATT_NAME’ defined but not used [-Wunused-variable] static const char *EDGELIST_ATT_NAME="edgelist"; ^~~~~~~~~~~~~~~~~ gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c graph.c -o graph.o gcc -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c rqubic.c -o rqubic.o In file included from rqubic.c:5:0: rqubic.h:62:20: warning: ‘MINCOL_ATT_NAME’ defined but not used [-Wunused-variable] static const char *MINCOL_ATT_NAME="minimumCol"; ^~~~~~~~~~~~~~~ rqubic.h:61:20: warning: ‘EDGELIST_ATT_NAME’ defined but not used [-Wunused-variable] static const char *EDGELIST_ATT_NAME="edgelist"; ^~~~~~~~~~~~~~~~~ gcc -shared -L/home/biocbuild/bbs-3.12-bioc/R/lib -L/usr/local/lib -o rqubic.so bicluster.o discretize.o fib.o graph.o rqubic.o -L/home/biocbuild/bbs-3.12-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.12-bioc/R/library/00LOCK-rqubic/00new/rqubic/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rqubic)