Yuchao Jiang
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/CODEX |
| Branch: RELEASE_3_12 |
| Last Commit: aa0ee42 |
| Last Changed Date: 2020-10-27 11:01:45 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:30:26 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the CODEX package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 348/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| CODEX 1.22.0 (landing page) Yuchao Jiang
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: CODEX |
| Version: 1.22.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/CODEX_1.22.0.tar.gz && rm -rf CODEX.buildbin-libdir && mkdir CODEX.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CODEX.buildbin-libdir CODEX_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL CODEX_1.22.0.zip && rm CODEX_1.22.0.tar.gz CODEX_1.22.0.zip |
| StartedAt: 2021-05-05 18:11:19 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:13:09 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 110.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/CODEX_1.22.0.tar.gz && rm -rf CODEX.buildbin-libdir && mkdir CODEX.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CODEX.buildbin-libdir CODEX_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL CODEX_1.22.0.zip && rm CODEX_1.22.0.tar.gz CODEX_1.22.0.zip
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install for i386
* installing *source* package 'CODEX' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'CODEX'
finding HTML links ... done
CODEX-package html
bambedObjDemo html
choiceofK html
coverageObjDemo html
gcDemo html
getbambed html
getcoverage html
getgc html
getmapp html
mappDemo html
mapp_ref html
mappability html
normObjDemo html
normalize html
normalize2 html
qc html
qcObjDemo html
segment html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'CODEX' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CODEX' as CODEX_1.22.0.zip
* DONE (CODEX)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'CODEX' successfully unpacked and MD5 sums checked