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BUILD report for SEPA on malbec1

This page was generated on 2020-04-15 12:10:10 -0400 (Wed, 15 Apr 2020).

Package 1556/1823HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SEPA 1.16.0
Zhicheng Ji
Snapshot Date: 2020-04-14 16:46:13 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/SEPA
Branch: RELEASE_3_10
Last Commit: 93fc1a4
Last Changed Date: 2019-10-29 13:09:20 -0400 (Tue, 29 Oct 2019)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK [ ERROR ] skipped 
tokay1 Windows Server 2012 R2 Standard / x64  OK  ERROR  skipped  skipped 
merida1 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: SEPA
Version: 1.16.0
Command: /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data SEPA
StartedAt: 2020-04-14 21:27:27 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 21:27:53 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 25.9 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.10-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data SEPA
###
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* checking for file ‘SEPA/DESCRIPTION’ ... OK
* preparing ‘SEPA’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘SEPA.Rnw’ using knitr
Quitting from lines 65-67 (SEPA.Rnw) 
Error: processing vignette 'SEPA.Rnw' failed with diagnostics:
$ operator is invalid for atomic vectors
--- failed re-building ‘SEPA.Rnw’

SUMMARY: processing the following file failed:
  ‘SEPA.Rnw’

Error: Vignette re-building failed.
Execution halted