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Package 274/436HostnameOS / ArchBUILDCHECKBUILD BIN
MLP 0.99.6
Tobias Verbeke
Snapshot Date: 2011-02-24 11:26:35 -0800 (Thu, 24 Feb 2011)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/MLP
Last Changed Rev: 52563 / Revision: 53255
Last Changed Date: 2011-02-10 02:35:32 -0800 (Thu, 10 Feb 2011)
lamb2 Linux (openSUSE 11.2) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ ERROR ] skipped  skipped 
gewurz Windows Server 2008 R2 Enterprise (64-bit) / x64  ERROR  skipped  skipped 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
petty Mac OS X Snow Leopard (10.6.4) / i386  ERROR  skipped  skipped 

Summary

Package: MLP
Version: 0.99.6
Command: chmod a+r MLP -R && E:\biocbld\bbs-2.8-bioc\R\bin\R.exe CMD build MLP
StartedAt: 2011-02-24 16:20:01 -0800 (Thu, 24 Feb 2011)
EndedAt: 2011-02-24 16:20:46 -0800 (Thu, 24 Feb 2011)
EllapsedTime: 44.8 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'MLP/DESCRIPTION' ... OK
* preparing 'MLP':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: MLP
Loading required package: AnnotationDbi
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: affy
Loading required package: plotrix
Loading required package: gplots
Loading required package: gtools
Loading required package: gdata
File type 'perl' not found or no open command associated with it.
File type 'perl' not found or no open command associated with it.
gdata: read.xls support for 'XLS' (Excel 97-2004) files ENABLED.

gdata: Unable to load perl libaries needed by read.xls()
gdata: to support 'XLSX' (Excel 2007+) files.

gdata: Run the function 'installXLSXsupport()'
gdata: to automatically download and install the perl
gdata: libaries needed to support Excel XLS and XLSX formats.

Attaching package: 'gdata'

The following object(s) are masked from 'package:Biobase':

    combine

The following object(s) are masked from 'package:utils':

    object.size

Loading required package: caTools
Loading required package: bitops
Loading required package: grid

Attaching package: 'gplots'

The following object(s) are masked from 'package:plotrix':

    plotCI

The following object(s) are masked from 'package:stats':

    lowess

Loading required package: gmodels
Loading required package: limma
Loading required package: mouse4302mmentrezg.db
Loading required package: GO.db
Loading required package: DBI
Loading required package: org.Mm.eg.db
Loading required package: Rgraphviz
Loading required package: graph
Loading required package: GOstats
Loading required package: Category
Loading required package: annotate

Attaching package: 'annotate'

The following object(s) are masked from 'package:Rgraphviz':

    toFile

Loading required package: mouse4302.db
Error: running 'texi2dvi' on 'UsingMLP.tex' failed

LaTeX errors:
tex:466: Package inputenc Error: Keyboard character used is undefined
(inputenc)                in inputencoding `utf8'.

See the inputenc package documentation for explanation.
Type  H <return>  for immediate help
In addition: Warning messages:
1: running command 'C:\WINDOWS\system32\cmd.exe /c ftype perl' had status 2 
2: running command 'C:\WINDOWS\system32\cmd.exe /c ftype perl' had status 2 
3: In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE,  :
  there is no package called 'mouse4302mmentrezg.db'
4: running command '"C:\PROGRA˜1\MIKTEX˜1.9\miktex\bin\texi2dvi.exe" --quiet --pdf "UsingMLP.tex"  -I "E:/biocbld/bbs-2.8-bioc/R/share/texmf/tex/latex" -I "E:/biocbld/bbs-2.8-bioc/R/share/texmf/bibtex/bst"' had status 1 
Execution halted