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Package 209/354HostnameOS / ArchBUILDCHECKBUILD BIN
mBPCR 1.1.0
P.M.V. Rancoita
Bioconductor Changelog
Snapshot Date: 2009-12-07 11:32:00 -0800 (Mon, 07 Dec 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/mBPCR
Last Changed Rev: 42686 / Revision: 43434
Last Changed Date: 2009-10-27 16:45:24 -0700 (Tue, 27 Oct 2009)
wilson1 Linux (openSUSE 11.1) / x86_64 [ ERROR ] skipped 
liverpool Windows Server 2003 R2 (32-bit) / x64  ERROR  skipped  skipped 
pitt Mac OS X Tiger (10.4.11) / i386  ERROR  skipped  skipped 
pelham Mac OS X Leopard (10.5.8) / i386  ERROR  skipped  skipped 
Package: mBPCR
Version: 1.1.0
Command: /home/biocbuild/bbs-2.6-bioc/R/bin/R CMD build mBPCR
StartedAt: 2009-12-07 15:02:44 -0800 (Mon, 07 Dec 2009)
EndedAt: 2009-12-07 15:03:47 -0800 (Mon, 07 Dec 2009)
EllapsedTime: 63.4 seconds
RetCode: 1
Status: ERROR
PackageFile: None
PackageFileSize: NA

Command output

* checking for file 'mBPCR/DESCRIPTION' ... OK
* preparing 'mBPCR':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* installing *source* package 'mBPCR' ...
** R
** data
**  moving datasets to lazyload DB
** inst
** preparing package for lazy loading
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Welcome to oligoClasses version 1.9.14
Welcome to SNPchip version 1.11.1

Attaching package: 'SNPchip'


	The following object(s) are masked from package:oligoClasses :

	 chromosome2integer 

** help
*** installing help indices
** building package indices ...
* DONE (mBPCR)
* creating vignettes ... ERROR
Loading required package: oligoClasses
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Welcome to oligoClasses version 1.9.14
Loading required package: SNPchip
Welcome to SNPchip version 1.11.1

Attaching package: 'SNPchip'


	The following object(s) are masked from package:oligoClasses :

	 chromosome2integer 

Estimation of global  parameters
Estimation of the profile of chromosome 3
Computation of log(A^0)
Computation of left and right recursions
Determination of PC Regression
Estimation of the profile of chromosome 5
Computation of log(A^0)
Computation of left and right recursions
Determination of PC Regression
Estimation of global  parameters
Estimation of the profile of chromosome 3
Computation of log(A^0)
Computation of left and right recursions
Determination of PC Regression
Computation of Bayesian regression Curve
Estimation of global  parameters
Computation of log(A^0)
Computation of left and right recursions
Determination of PC Regression
Computation of Bayesian regression Curve
Estimation of global  parameters
Estimation of the profile of chromosome 8
Computation of log(A^0)
Computation of left and right recursions
Determination of PC Regression
Estimation of global  parameters
Estimation of the profile of chromosome 8
Computation of log(A^0)
Computation of left and right recursions
Determination of PC Regression

Error: processing vignette 'mBPCR.Rnw' failed with diagnostics:
 chunk 32 
Error in `sampleNames<-`(`*tmp*`, value = c("NA17101_X_hAF_A1_4000091.CEL",  : 
  'value' length (5) must equal sample number in AssayData (5)
Execution halted