mBPCR 1.1.0
P.M.V. Rancoita
| Bioconductor Changelog | | Snapshot Date: 2009-12-07 11:32:00 -0800 (Mon, 07 Dec 2009) | | URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/mBPCR | | Last Changed Rev: 42686 / Revision: 43434 | | Last Changed Date: 2009-10-27 16:45:24 -0700 (Tue, 27 Oct 2009) |
| wilson1 | Linux (openSUSE 11.1) / x86_64 | ERROR | skipped | |
| liverpool | Windows Server 2003 R2 (32-bit) / x64 | ERROR | skipped | skipped |
| pitt | Mac OS X Tiger (10.4.11) / i386 | ERROR | skipped | skipped |
| pelham | Mac OS X Leopard (10.5.8) / i386 | [ ERROR ] | skipped | skipped |
* checking for file 'mBPCR/DESCRIPTION' ... OK
* preparing 'mBPCR':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* installing *source* package ‘mBPCR’ ...
** R
** data
** moving datasets to lazyload DB
** inst
** preparing package for lazy loading
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Welcome to oligoClasses version 1.9.14
Welcome to SNPchip version 1.11.1
Attaching package: 'SNPchip'
The following object(s) are masked from package:oligoClasses :
chromosome2integer
** help
*** installing help indices
** building package indices ...
* DONE (mBPCR)
* creating vignettes ... ERROR
Loading required package: oligoClasses
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()'. To cite Bioconductor, see
'citation("Biobase")' and for packages 'citation(pkgname)'.
Welcome to oligoClasses version 1.9.14
Loading required package: SNPchip
Welcome to SNPchip version 1.11.1
Attaching package: 'SNPchip'
The following object(s) are masked from package:oligoClasses :
chromosome2integer
Estimation of global parameters
Estimation of the profile of chromosome 3
Computation of log(A^0)
Computation of left and right recursions
Determination of PC Regression
Estimation of the profile of chromosome 5
Computation of log(A^0)
Computation of left and right recursions
Determination of PC Regression
Estimation of global parameters
Estimation of the profile of chromosome 3
Computation of log(A^0)
Computation of left and right recursions
Determination of PC Regression
Computation of Bayesian regression Curve
Estimation of global parameters
Computation of log(A^0)
Computation of left and right recursions
Determination of PC Regression
Computation of Bayesian regression Curve
Estimation of global parameters
Estimation of the profile of chromosome 8
Computation of log(A^0)
Computation of left and right recursions
Determination of PC Regression
Estimation of global parameters
Estimation of the profile of chromosome 8
Computation of log(A^0)
Computation of left and right recursions
Determination of PC Regression
Error: processing vignette 'mBPCR.Rnw' failed with diagnostics:
chunk 32
Error in `sampleNames<-`(`*tmp*`, value = c("NA17101_X_hAF_A1_4000091.CEL", :
'value' length (5) must equal sample number in AssayData (5)
Execution halted