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Package 299/319HostnameOS / ArchBUILDCHECKBUILD BIN
stam 1.12.0
Claudio Lottaz
Bioconductor Changelog
Snapshot Date: 2009-10-20 11:27:33 -0700 (Tue, 20 Oct 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_4/madman/Rpacks/stam
Last Changed Rev: 39013 / Revision: 42512
Last Changed Date: 2009-04-20 16:24:12 -0700 (Mon, 20 Apr 2009)
wilson1 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 
Package: stam
Version: 1.12.0
Command: E:\biocbld\bbs-2.4-bioc\R\bin\R.exe CMD build stam
StartedAt: 2009-10-20 14:27:46 -0700 (Tue, 20 Oct 2009)
EndedAt: 2009-10-20 14:29:14 -0700 (Tue, 20 Oct 2009)
EllapsedTime: 88.0 seconds
RetCode: 0
Status: OK
PackageFile: stam_1.12.0.tar.gz
PackageFileSize: 1.904 MiB

Command output

* checking for file 'stam/DESCRIPTION' ... OK
* preparing 'stam':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
* Installing *source* package 'stam' ...
** libs
  making DLL ...
gcc -I"e:/biocbld/bbs-2.4-bioc/R/include"        -O3 -Wall  -std=gnu99 -c util.c -o util.o
gcc -shared -s -o stam.dll tmp.def util.o -Le:/biocbld/bbs-2.4-bioc/R/bin -lR
  ... done
** R
** data
** inst
** preparing package for lazy loading
Loading required package: AnnotationDbi
Loading required package: Biobase

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: DBI
Loading required package: cluster
Loading required package: survival
Loading required package: splines
Loading required package: KEGG.db
** help
*** installing help indices
 >>> Building/Updating help pages for package 'stam'
     Formats: text html latex example chm 
  golubTrain.cv                     text    html    latex           chm
  golubTrain.fit                    text    html    latex           chm
  image.stamPrediction              text    html    latex           chm
  plot.stamCV                       text    html    latex           chm
  plot.stamFit                      text    html    latex           chm
  plot.stamPrediction               text    html    latex           chm
  stam-internal                     text    html    latex           chm
  stam.cv                           text    html    latex   example chm
  stam.evaluate                     text    html    latex   example chm
  stam.fit                          text    html    latex   example chm
  stam.graph.plot                   text    html    latex           chm
  stam.net                          text    html    latex   example chm
  stam.predict                      text    html    latex   example chm
  stam.rgb.colors                   text    html    latex   example chm
  stam.serve                        text    html    latex   example chm
  stam.writeHTML                    text    html    latex   example chm
  stamCV-class                      text    html    latex           chm
  stamEval-class                    text    html    latex           chm
  stamFit-class                     text    html    latex           chm
  stamINode-class                   text    html    latex           chm
  stamLeaf-class                    text    html    latex           chm
  stamNet-class                     text    html    latex           chm
  stamNode-class                    text    html    latex           chm
  stamPrediction-class              text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.4-bioc\meat\stam\chm\stam.chm





Compile time: 0 minutes, 1 second

25	Topics

128	Local links

0	Internet links

1	Graphic





Created e:\biocbld\bbs-2.4-bioc\meat\stam\chm\stam.chm, 54,807 bytes

Compression decreased file by 55,281 bytes.

** building package indices ...
Welcome to Structured Analysis of Microarrays

** MD5 sums
* DONE (stam)
* creating vignettes ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'stam_1.12.0.tar.gz'