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Package 151/294HostnameOS / ArchBUILDCHECKBUILD BIN
LMGene 1.12.0
John Tillinghast
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/LMGene
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64 [ OK ] OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK  OK 
Package: LMGene
Version: 1.12.0
Command: E:\biocbld\bbs-2.3-bioc\R\bin\R.exe CMD build LMGene
StartedAt: 2009-04-18 16:37:27 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 16:39:00 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 93.3 seconds
RetCode: 0
Status: OK
PackageFile: LMGene_1.12.0.tar.gz
PackageFileSize: 221.9 KiB

Command output

* checking for file 'LMGene/DESCRIPTION' ... OK
* preparing 'LMGene':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in E:/biocbld/bbs-2.3-bioc/tmpdir/Rinst435627621


---------- Making package LMGene ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  preparing package LMGene for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: multtest
Loading required package: survival
Loading required package: splines
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'LMGene'
     Formats: text html latex example chm 
Note: removing empty section \details in file 'GetLMObj.Rd'
Note: removing empty section \note in file 'GetLMObj.Rd'
Note: removing empty section \references in file 'GetLMObj.Rd'
Note: removing empty section \seealso in file 'GetLMObj.Rd'
Note: removing empty section \details in file 'GetLMObj.Rd'
Note: removing empty section \note in file 'GetLMObj.Rd'
Note: removing empty section \references in file 'GetLMObj.Rd'
Note: removing empty section \seealso in file 'GetLMObj.Rd'
  GetLMObj                          text    html    latex   example chm
  LMGene                            text    html    latex   example chm
  genediff                          text    html    latex   example chm
  glog                              text    html    latex   example chm
  jggrad2                           text    html    latex   example chm
  jglog                             text    html    latex   example chm
  lnorm                             text    html    latex   example chm
Note: removing empty section \details in file 'lnormeS.Rd'
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  lnormeS                           text    html    latex   example chm
Note: removing empty section \seealso in file 'mlm2lm.Rd'
Note: removing empty section \seealso in file 'mlm2lm.Rd'
  mlm2lm                            text    html    latex   example chm
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  msa                               text    html    latex   example chm
  msecalc                           text    html    latex   example chm
  msecalcmult                       text    html    latex   example chm
  neweS                             text    html    latex   example chm
  norm                              text    html    latex   example chm
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Note: removing empty section \seealso in file 'psmeans.Rd'
  psmeans                           text    html    latex   example chm
  pvadjust                          text    html    latex   example chm
  rowaov                            text    html    latex   example chm
  rowlist                           text    html    latex   example chm
  sample.eS                         text    html    latex   example chm
Note: removing empty section \details in file 'sample.ind.Rd'
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  sample.ind                        text    html    latex   example chm
  sample.mat                        text    html    latex   example chm
  tranest                           text    html    latex   example chm
  tranest2                          text    html    latex   example chm
  tranestmult                       text    html    latex   example chm
Note: removing empty section \details in file 'transeS.Rd'
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  transeS                           text    html    latex   example chm
  vlist                             text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling e:\biocbld\bbs-2.3-bioc\meat\LMGene\chm\LMGene.chm





Compile time: 0 minutes, 2 seconds

27	Topics

109	Local links

19	Internet links

1	Graphic





Created e:\biocbld\bbs-2.3-bioc\meat\LMGene\chm\LMGene.chm, 38,807 bytes

Compression decreased file by 41,504 bytes.

  adding MD5 sums

* DONE (LMGene)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building 'LMGene_1.12.0.tar.gz'