Back to the "Multiple platform build/check report" A [B] C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

Package 39/294HostnameOS / ArchBUILDCHECKBUILD BIN
BicARE 1.0.0
Pierre Gestraud ,
Bioconductor Changelog
Snapshot Date: 2009-04-18 11:27:48 -0700 (Sat, 18 Apr 2009)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_3/madman/Rpacks/BicARE
Last Changed Rev: 34811 / Revision: 38965
Last Changed Date: 2008-10-21 15:32:58 -0700 (Tue, 21 Oct 2008)
wilson2 Linux (openSUSE 11.1) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK  OK 
pelham Mac OS X Leopard (10.5.6) / i386  OK  OK [ OK ]
Package: BicARE
Version: 1.0.0
Command: /Users/biocbuild/BBS/utils/build-universal.sh BicARE_1.0.0.tar.gz /Library/Frameworks/R.framework/Versions/2.8/Resources/bin/R BicARE.buildbin-libdir
StartedAt: 2009-04-18 18:45:57 -0700 (Sat, 18 Apr 2009)
EndedAt: 2009-04-18 18:46:09 -0700 (Sat, 18 Apr 2009)
EllapsedTime: 11.8 seconds
RetCode: 0
Status: OK
PackageFile: BicARE_1.0.0.tgz
PackageFileSize: 349.3 KiB

Command output

                INSTALLATION WITH 'R CMD INSTALL --library=BicARE.buildbin-libdir BicARE_1.0.0.tar.gz'

* Installing *source* package 'BicARE' ...
** libs
** arch - i386
gcc-4.2 -arch i386 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include/i386  -I/usr/local/include    -fPIC  -g -O2 -Wall -c BicARE.c -o BicARE.o
BicARE.c: In function 'floc':
BicARE.c:439: warning: unused variable 'invk'
BicARE.c: In function 'action':
BicARE.c:270: warning: 'j' may be used uninitialized in this function
BicARE.c:270: warning: 'i' may be used uninitialized in this function
gcc-4.2 -arch i386 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names  -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o BicARE.so BicARE.o   -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** arch - ppc
gcc-4.2 -arch ppc -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -Wall -c BicARE.c -o BicARE.o
BicARE.c: In function 'floc':
BicARE.c:439: warning: unused variable 'invk'
BicARE.c: In function 'action':
BicARE.c:270: warning: 'j' may be used uninitialized in this function
BicARE.c:270: warning: 'i' may be used uninitialized in this function
gcc-4.2 -arch ppc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names  -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o BicARE.so BicARE.o   -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** arch - ppc64
gcc-4.2 -arch ppc64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include/ppc64  -I/usr/local/include    -fPIC  -g -O2 -Wall -c BicARE.c -o BicARE.o
BicARE.c: In function 'floc':
BicARE.c:439: warning: unused variable 'invk'
BicARE.c: In function 'action':
BicARE.c:270: warning: 'j' may be used uninitialized in this function
BicARE.c:270: warning: 'i' may be used uninitialized in this function
gcc-4.2 -arch ppc64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names  -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o BicARE.so BicARE.o   -L/Library/Frameworks/R.framework/Versions/2.8/Resources/lib/ppc64 -lR -dylib_file libRblas.dylib:/Library/Frameworks/R.framework/Versions/2.8/Resources/lib/ppc64/libRblas.dylib -Wl,-framework -Wl,CoreFoundation
** arch - x86_64
gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include -I/Library/Frameworks/R.framework/Versions/2.8/Resources/include/x86_64  -I/usr/local/include    -fPIC  -g -O2 -Wall -c BicARE.c -o BicARE.o
BicARE.c: In function 'floc':
BicARE.c:439: warning: unused variable 'invk'
BicARE.c: In function 'action':
BicARE.c:270: warning: 'j' may be used uninitialized in this function
BicARE.c:270: warning: 'i' may be used uninitialized in this function
gcc-4.2 -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names  -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o BicARE.so BicARE.o   -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
** R
** data
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: multtest
Loading required package: GSEABase
Loading required package: AnnotationDbi
Loading required package: annotate
Loading required package: xtable
Loading required package: graph
** help
 >>> Building/Updating help pages for package 'BicARE'
     Formats: text html latex example 
  BicARE-package                    text    html    latex
  FLOC                              text    html    latex   example
  bicluster                         text    html    latex   example
  makeReport                        text    html    latex   example
  residue                           text    html    latex   example
  sample.bicData                    text    html    latex
  sample.biclustering               text    html    latex
  testAnnot                         text    html    latex   example
  testSet                           text    html    latex   example
** building package indices ...
* DONE (BicARE)