RNAseqData.HNRNPC.bam.chr14 0.2.0
H. Pages
| Snapshot Date: 2014-10-04 07:15:22 -0700 (Sat, 04 Oct 2014) | | URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_2_14/experiment/pkgs/RNAseqData.HNRNPC.bam.chr14 | | Last Changed Rev: 2799 / Revision: 3055 | | Last Changed Date: 2014-04-11 14:27:08 -0700 (Fri, 11 Apr 2014) |
| zin2 | Linux (Ubuntu 12.04.4 LTS) / x86_64 | NotNeeded | OK | WARNINGS | |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | [ WARNINGS ] | OK |
| petty | Mac OS X Snow Leopard (10.6.8) / x86_64 | NotNeeded | OK | WARNINGS | OK |
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### Running command:
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### rm -rf RNAseqData.HNRNPC.bam.chr14.buildbin-libdir && mkdir RNAseqData.HNRNPC.bam.chr14.buildbin-libdir && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=RNAseqData.HNRNPC.bam.chr14.buildbin-libdir RNAseqData.HNRNPC.bam.chr14_0.2.0.tar.gz >RNAseqData.HNRNPC.bam.chr14-install.out 2>&1 && E:\biocbld\bbs-2.14-bioc\R\bin\R.exe CMD check --library=RNAseqData.HNRNPC.bam.chr14.buildbin-libdir --install="check:RNAseqData.HNRNPC.bam.chr14-install.out" --force-multiarch --no-vignettes --timings RNAseqData.HNRNPC.bam.chr14_0.2.0.tar.gz
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* using log directory 'E:/biocbld/bbs-2.14-data-experiment/meat/RNAseqData.HNRNPC.bam.chr14.Rcheck'
* using R version 3.1.1 (2014-07-10)
* using platform: i386-w64-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'RNAseqData.HNRNPC.bam.chr14/DESCRIPTION' ... OK
* this is package 'RNAseqData.HNRNPC.bam.chr14' version '0.2.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'RNAseqData.HNRNPC.bam.chr14' can be installed ... OK
* checking installed package size ... NOTE
installed size is 420.0Mb
sub-directories of 1Mb or more:
extdata 419.9Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ...
** running examples for arch 'i386' ... [24s] WARNING
Found the following significant warnings:
Warning: 'ngap' is deprecated.
Warning: 'ngap' is deprecated.
Warning: 'ngap' is deprecated.
Warning: 'ngap' is deprecated.
Deprecated functions may be defunct as soon as of the next release of
R.
See ?Deprecated.
Examples with CPU or elapsed time > 5s
user system elapsed
RNAseqData.HNRNPC.bam.chr14-package 23.2 0.55 23.77
** running examples for arch 'x64' ... [26s] WARNING
Found the following significant warnings:
Warning: 'ngap' is deprecated.
Warning: 'ngap' is deprecated.
Warning: 'ngap' is deprecated.
Warning: 'ngap' is deprecated.
Deprecated functions may be defunct as soon as of the next release of
R.
See ?Deprecated.
Examples with CPU or elapsed time > 5s
user system elapsed
RNAseqData.HNRNPC.bam.chr14-package 24.99 0.56 25.57
* checking PDF version of manual ... OK
WARNING: There were 2 warnings.
NOTE: There was 1 note.
See
'E:/biocbld/bbs-2.14-data-experiment/meat/RNAseqData.HNRNPC.bam.chr14.Rcheck/00check.log'
for details.
install for i386
* installing *source* package 'RNAseqData.HNRNPC.bam.chr14' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
install for x64
* installing *source* package 'RNAseqData.HNRNPC.bam.chr14' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'RNAseqData.HNRNPC.bam.chr14' as RNAseqData.HNRNPC.bam.chr14_0.2.0.zip
* DONE (RNAseqData.HNRNPC.bam.chr14)
RNAseqData.HNRNPC.bam.chr14.Rcheck/examples_i386/RNAseqData.HNRNPC.bam.chr14-Ex.timings:
RNAseqData.HNRNPC.bam.chr14.Rcheck/examples_x64/RNAseqData.HNRNPC.bam.chr14-Ex.timings: