Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S [T] U  V  W  X  Y  Z 

BioC 2.12: BUILD BIN report for triplex on moscato2

This page was generated on 2013-10-09 09:39:19 -0700 (Wed, 09 Oct 2013).

Package 644/671HostnameOS / ArchBUILDCHECKBUILD BIN
triplex 1.0.10
Jiri Hon
Snapshot Date: 2013-10-08 17:00:48 -0700 (Tue, 08 Oct 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_12/madman/Rpacks/triplex
Last Changed Rev: 79331 / Revision: 81334
Last Changed Date: 2013-08-08 12:20:19 -0700 (Thu, 08 Aug 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
petty Mac OS X Snow Leopard (10.6.8) / x86_64  OK  OK  OK 

Summary

Package: triplex
Version: 1.0.10
Command: rm -rf triplex.buildbin-libdir && mkdir triplex.buildbin-libdir && E:\biocbld\bbs-2.12-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=triplex.buildbin-libdir triplex_1.0.10.tar.gz
StartedAt: 2013-10-09 05:33:01 -0700 (Wed, 09 Oct 2013)
EndedAt: 2013-10-09 05:34:00 -0700 (Wed, 09 Oct 2013)
EllapsedTime: 58.5 seconds
RetCode: 0
Status:  OK  
PackageFile: triplex_1.0.10.zip
PackageFileSize: 624.6 KiB

Command output


install for i386

* installing *source* package 'triplex' ...
** libs
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c Biostrings_stubs.c -o Biostrings_stubs.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c IRanges_stubs.c -o IRanges_stubs.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c R_init_triplex.c -o R_init_triplex.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c align.c -o align.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c align_interface.c -o align_interface.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c dl_list.c -o dl_list.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c libtriplex.c -o libtriplex.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c progress.c -o progress.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c search.c -o search.o
gcc -m32 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c search_interface.c -o search_interface.o
gcc -m32 -shared -s -static-libgcc -o triplex.dll tmp.def Biostrings_stubs.o IRanges_stubs.o R_init_triplex.o align.o align_interface.o dl_list.o libtriplex.o progress.o search.o search_interface.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/i386 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2˜1.12-/R/bin/i386 -lR
installing to E:/biocbld/bbs-2.12-bioc/meat/triplex.buildbin-libdir/triplex/libs/i386
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'triplex' ...
** libs
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c Biostrings_stubs.c -o Biostrings_stubs.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c IRanges_stubs.c -o IRanges_stubs.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c R_init_triplex.c -o R_init_triplex.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c align.c -o align.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c align_interface.c -o align_interface.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c dl_list.c -o dl_list.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c libtriplex.c -o libtriplex.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c progress.c -o progress.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c search.c -o search.o
gcc -m64 -I"E:/biocbld/BBS-2˜1.12-/R/include" -DNDEBUG    -I"E:/biocbld/bbs-2.12-bioc/R/library/Biostrings/include" -I"E:/biocbld/bbs-2.12-bioc/R/library/IRanges/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c search_interface.c -o search_interface.o
gcc -m64 -shared -s -static-libgcc -o triplex.dll tmp.def Biostrings_stubs.o IRanges_stubs.o R_init_triplex.o align.o align_interface.o dl_list.o libtriplex.o progress.o search.o search_interface.o -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LE:/biocbld/BBS-2˜1.12-/R/bin/x64 -lR
installing to E:/biocbld/bbs-2.12-bioc/meat/triplex.buildbin-libdir/triplex/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'triplex' as triplex_1.0.10.zip
* DONE (triplex)