Back to the "Multiple platform build/check report" A  B  C  D  E  F  G  H  I  J  K  L  M  N  O [P] Q  R  S  T  U  V  W  X  Y  Z 

Package 158/233HostnameOS / ArchBUILDCHECKBUILD BIN
pdInfoBuilder 1.2.0
Vince Carey
Snapshot Date: 2008-04-09 12:13:20 -0700 (Wed, 09 Apr 2008)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_1/madman/Rpacks/pdInfoBuilder
Last Changed Rev: 27709 / Revision: 30966
Last Changed Date: 2007-10-02 17:41:09 -0700 (Tue, 02 Oct 2007)
lamb1 Linux (SUSE 10.1) / x86_64  OK  OK 
wilson2 Linux (openSUSE 10.3) / x86_64  OK  OK 
wellington Linux (openSUSE 10.3) / i686  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
lemming Windows Server 2003 (32-bit) / x64  OK  OK  OK 
pitt Mac OS X Tiger (10.4.11) / i386  OK  OK [ OK ]
Package: pdInfoBuilder
Version: 1.2.0
Command: /Users/biocbuild/BBS/utils/build-universal.sh pdInfoBuilder_1.2.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R pdInfoBuilder.buildbin-libdir
StartedAt: 2008-04-09 17:27:04 -0700 (Wed, 09 Apr 2008)
EndedAt: 2008-04-09 17:27:14 -0700 (Wed, 09 Apr 2008)
EllapsedTime: 10.2 seconds
RetCode: 0
Status: OK
PackageFile: pdInfoBuilder_1.2.0.tgz
PackageFileSize: 156.2 KiB

Command output

                INSTALLATION WITH 'R CMD INSTALL pdInfoBuilder_1.2.0.tar.gz'

* Installing to library 'pdInfoBuilder.buildbin-libdir'
* Installing *source* package 'pdInfoBuilder' ...
** libs
** arch - i386
gcc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/i386  -msse3    -fPIC  -g -O2 -march=nocona -c pdInfoBuilder.c -o pdInfoBuilder.o
gcc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -Wl,-macosx_version_min -Wl,10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o pdInfoBuilder.so pdInfoBuilder.o   -F/Library/Frameworks/R.framework/.. -framework R 
** arch - ppc
gcc -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -no-cpp-precomp -I/Library/Frameworks/R.framework/Resources/include -I/Library/Frameworks/R.framework/Resources/include/ppc  -I/usr/local/include    -fPIC  -g -O2 -c pdInfoBuilder.c -o pdInfoBuilder.o
gcc -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk -mmacosx-version-min=10.4 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -Wl,-macosx_version_min -Wl,10.4 -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o pdInfoBuilder.so pdInfoBuilder.o   -F/Library/Frameworks/R.framework/.. -framework R 
** R
** inst
** preparing package for lazy loading
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'openVignette()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation(pkgname)'.

Loading required package: RSQLite
Loading required package: DBI
Loading required package: affxparser
Loading required package: oligo
Loading required package: splines
Loading required package: preprocessCore
Loading required package: AnnotationDbi
Loading required package: oligoClasses
This is the oligo package

Attaching package: 'oligo'


	The following object(s) are masked from package:oligoClasses :

	 calls,
	 calls<-,
	 callsConfidence,
	 callsConfidence<-,
	 cnConfidence,
	 cnConfidence<-,
	 copyNumber,
	 copyNumber<- 

** help
 >>> Building/Updating help pages for package 'pdInfoBuilder'
     Formats: text html latex example 
  AffySNPCNVPDInfoPkgSeed-class     text    html    latex   example
  AffySNPPDInfoPkgSeed-class        text    html    latex   example
  PDInfoPkgSeed-class               text    html    latex   example
  PkgSeed-class                     text    html    latex   example
  chipName                          text    html    latex
  makePdInfoPackage                 text    html    latex   example
** building package indices ...
* DONE (pdInfoBuilder)