biocViews

DOI: 10.18129/B9.bioc.biocViews    

Categorized views of R package repositories

Bioconductor version: Release (3.6)

Infrastructure to support Bioconductor 'views' used to classify software packages. 'biocViews' are directed acyclic graphs of terms from a controlled vocabulary. There are three major classifications, corresponding to 'software', 'annotation', and 'experiment data' packages.

Author: VJ Carey <stvjc at channing.harvard.edu>, BJ Harshfield <rebjh at channing.harvard.edu>, S Falcon <sfalcon at fhcrc.org> , Sonali Arora

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("biocViews")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("biocViews")

 

PDF	R Script	biocViews-CreateRepositoryHTML
PDF	R Script	biocViews-HOWTO
PDF		Reference Manual
Text		NEWS

Details

biocViews	Infrastructure, Software
Version	1.46.0
In Bioconductor since	BioC 1.8 (R-2.3) (12 years)
License	Artistic-2.0
Depends	R (>= 2.4.0)
Imports	Biobase, graph(>= 1.9.26), methods, RBGL(>= 1.13.5), tools, utils, XML, RCurl, RUnit
LinkingTo
Suggests	BiocGenerics, knitr
SystemRequirements
Enhances
URL	http://www.bioconductor.org/packages/release/BiocViews.html
Depends On Me	Risa
Imports Me	AnnotationHubData, BiocCheck, monocle, RforProteomics
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	biocViews_1.46.0.tar.gz
Windows Binary	biocViews_1.46.0.zip
Mac OS X 10.11 (El Capitan)	biocViews_1.46.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/biocViews
Package Short Url	http://bioconductor.org/packages/biocViews/
Package Downloads Report	Download Stats