biocViews

DOI: 10.18129/B9.bioc.biocViews    

Categorized views of R package repositories

Bioconductor version: Release (3.6)

Infrastructure to support Bioconductor 'views' used to classify software packages. 'biocViews' are directed acyclic graphs of terms from a controlled vocabulary. There are three major classifications, corresponding to 'software', 'annotation', and 'experiment data' packages.

Author: VJ Carey <stvjc at channing.harvard.edu>, BJ Harshfield <rebjh at channing.harvard.edu>, S Falcon <sfalcon at fhcrc.org> , Sonali Arora

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("biocViews")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("biocViews")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("biocViews")

 

PDF R Script biocViews-CreateRepositoryHTML
PDF R Script biocViews-HOWTO
PDF   Reference Manual
Text   NEWS

Details

biocViews Infrastructure, Software
Version 1.46.0
In Bioconductor since BioC 1.8 (R-2.3) (12 years)
License Artistic-2.0
Depends R (>= 2.4.0)
Imports Biobase, graph(>= 1.9.26), methods, RBGL(>= 1.13.5), tools, utils, XML, RCurl, RUnit
LinkingTo
Suggests BiocGenerics, knitr
SystemRequirements
Enhances
URL http://www.bioconductor.org/packages/release/BiocViews.html
Depends On Me Risa
Imports Me AnnotationHubData, BiocCheck, monocle, RforProteomics
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package biocViews_1.46.0.tar.gz
Windows Binary biocViews_1.46.0.zip
Mac OS X 10.11 (El Capitan) biocViews_1.46.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/biocViews
Package Short Url http://bioconductor.org/packages/biocViews/
Package Downloads Report Download Stats

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