To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("gQTLstats")
In most cases, you don't need to download the package archive at all.
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Bioconductor version: Release (3.4)
computationally efficient analysis of eQTL, mQTL, dsQTL, etc.
Author: VJ Carey <stvjc at channing.harvard.edu>
Maintainer: VJ Carey <stvjc at channing.harvard.edu>
Citation (from within R,
enter citation("gQTLstats")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("gQTLstats")
HTML | R Script | gQTLstats: statistics for genetics of genomic features |
Reference Manual |
biocViews | Software |
Version | 1.6.0 |
In Bioconductor since | BioC 3.1 (R-3.2) (2 years) |
License | Artistic-2.0 |
Depends | R (>= 3.1.0) |
Imports | methods, snpStats, BiocGenerics, S4Vectors(>= 0.9.25), IRanges, GenomeInfoDb, GenomicFiles, GenomicRanges, SummarizedExperiment, VariantAnnotation, Biobase, BatchJobs, gQTLBase, limma, mgcv, dplyr, AnnotationDbi, GenomicFeatures, ggplot2, reshape2, doParallel, foreach, ffbase, BBmisc, beeswarm |
LinkingTo | |
Suggests | geuvPack, geuvStore2, Rsamtools, knitr, rmarkdown, ggbio, BiocStyle, Homo.sapiens, RUnit, multtest |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | gwascat |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | gQTLstats_1.6.0.tar.gz |
Windows Binary | gQTLstats_1.6.0.zip |
Mac OS X 10.9 (Mavericks) | gQTLstats_1.6.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/gQTLstats/tree/release-3.4 |
Package Short Url | http://bioconductor.org/packages/gQTLstats/ |
Package Downloads Report | Download Stats |
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