To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("miRLAB")
In most cases, you don't need to download the package archive at all.
miRLAB
|
Dry lab for exploring miRNA-mRNA relationships
Bioconductor version: 3.2
Provide tools exploring miRNA-mRNA relationships, including popular miRNA target prediction methods, ensemble methods that integrate individual methods, functions to get data from online resources, functions to validate the results, and functions to conduct enrichment analyses.
Author: Thuc Duy Le, Junpeng Zhang
Maintainer: Thuc Duy Le <Thuc.Le at unisa.edu.au>
Citation (from within R,
enter citation("miRLAB")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("miRLAB")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("miRLAB")
| HTML | miRLAB | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | GeneExpression, Network, NetworkInference, Software, miRNA |
| Version | 1.0.1 |
| In Bioconductor since | BioC 3.2 (R-3.2) (0.5 years) |
| License | GPL (>=2) |
| Depends | |
| Imports | RCurl, httr, stringr, Hmisc, energy, entropy, Roleswitch, gplots, glmnet, impute, limma, pcalg |
| LinkingTo | |
| Suggests | knitr, RUnit, BiocGenerics, AnnotationDbi, org.Hs.eg.db, GOstats, Category |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | miRLAB_1.0.1.tar.gz |
| Windows Binary | miRLAB_1.0.1.zip |
| Mac OS X 10.6 (Snow Leopard) | miRLAB_1.0.0.tgz |
| Mac OS X 10.9 (Mavericks) | miRLAB_1.0.1.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/miRLAB/tree/release-3.2 |
| Package Short Url | http://bioconductor.org/packages/miRLAB/ |
| Package Downloads Report | Download Stats |
Documentation »
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