WeberDivechaLCdata

DOI: 10.18129/B9.bioc.WeberDivechaLCdata  

Spatially-resolved transcriptomics and single-nucleus RNA-sequencing data from the locus coeruleus (LC) in postmortem human brain samples

Bioconductor version: Release (3.17)

Spatially-resolved transcriptomics (SRT) and single-nucleus RNA-sequencing (snRNA-seq) data from the locus coeruleus (LC) in postmortem human brain samples. Data were generated with the 10x Genomics Visium SRT and 10x Genomics Chromium snRNA-seq platforms. Datasets are stored in SpatialExperiment and SingleCellExperiment formats.

Author: Lukas M. Weber [aut, cre] , Heena R. Divecha [aut]

Maintainer: Lukas M. Weber <lukas.weber.edu at gmail.com>

Installation

To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("WeberDivechaLCdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("WeberDivechaLCdata")

 

HTML	R Script	WeberDivechaLCdata package
PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	ExperimentData, ExperimentHub, ExpressionData, Homo_sapiens_Data, RNASeqData, ReproducibleResearch, SequencingData, SingleCellData, SpatialData
Version	1.2.0
License	MIT + file LICENSE
Depends	ExperimentHub, SpatialExperiment, SingleCellExperiment
Imports	utils
LinkingTo
Suggests	BiocStyle, knitr, rmarkdown
SystemRequirements
Enhances
URL	https://github.com/lmweber/WeberDivechaLCdata
BugReports	https://github.com/lmweber/WeberDivechaLCdata/issues
Depends On Me
Imports Me
Suggests Me	nnSVG
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	WeberDivechaLCdata_1.2.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/WeberDivechaLCdata
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/WeberDivechaLCdata
Package Short Url	https://bioconductor.org/packages/WeberDivechaLCdata/
Package Downloads Report	Download Stats