BSgenome.Mmusculus.UCSC.mm39

DOI: 10.18129/B9.bioc.BSgenome.Mmusculus.UCSC.mm39  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Mmusculus.UCSC.mm39.

Full genome sequences for Mus musculus (UCSC genome mm39, based on GRCm39)

Bioconductor version: 3.16

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (genome mm39, based on assembly GRCm39) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Mmusculus.UCSC.mm39")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	AnnotationData, BSgenome, Genetics, Mus_musculus
Version	1.4.3
License	Artistic-2.0
Depends	R (>= 3.5.0), BSgenome(>= 1.60.0)
Imports	BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BSgenome.Mmusculus.UCSC.mm39_1.4.3.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url	https://bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm39/
Package Downloads Report	Download Stats