BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0

DOI: 10.18129/B9.bioc.BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0  

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0.

T2T-CHM13v2.0 assembly (Homo sapiens) wrapped in a BSgenome object

Bioconductor version: 3.16

The T2T-CHM13v2.0 assembly (accession GCA_009914755.4), as submitted to NCBI by the T2T Consortium, and wrapped in a BSgenome object. Companion paper: "The complete sequence of a human genome" by Nurk S, Koren S, Rhie A, Rautiainen M, et al. Science, 2022.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	AnnotationData, BSgenome, Genetics, Homo_sapiens
Version	1.5.0
License	Artistic-2.0
Depends	R (>= 3.5.0), BSgenome(>= 1.62.0)
Imports	BSgenome
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0_1.5.0.tar.gz
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macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url	https://bioconductor.org/packages/BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0/
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