Bioconductor version: Release (3.14)
Implement in an efficient approach to display the genomic data, relationship, information in an interactive circular genome(Circos) plot. 'interacCircos' are inspired by 'circosJS', 'BioCircos.js' and 'NG-Circos' and we integrate the modules of 'circosJS', 'BioCircos.js' and 'NG-Circos' into this R package, based on 'htmlwidgets' framework.
Author: Zhe Cui [aut, cre]
Maintainer: Zhe Cui <mrcuizhe at gmail.com>
Citation (from within R,
enter citation("interacCircos")
):
To install this package, start R (version "4.1") and enter:
if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("interacCircos")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("interacCircos")
HTML | R Script | interacCircos |
Reference Manual |
biocViews | Software, Visualization |
Version | 1.4.0 |
In Bioconductor since | BioC 3.13 (R-4.1) (1 year) |
License | GPL-3 |
Depends | R (>= 4.1) |
Imports | RColorBrewer, htmlwidgets, plyr, methods |
LinkingTo | |
Suggests | knitr, rmarkdown |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | interacCircos_1.4.0.tar.gz |
Windows Binary | interacCircos_1.4.0.zip |
macOS 10.13 (High Sierra) | interacCircos_1.4.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/interacCircos |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/interacCircos |
Package Short Url | https://bioconductor.org/packages/interacCircos/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.14 | Source Archive |
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