CircosHistogram {interacCircos} | R Documentation |
Create a multi-layer histogram plot
CircosHistogram( modulename, compareGroup = 1, maxRadius = 108, minRadius = 95, ValueAxisManualScale = FALSE, ValueAxisMaxScale = 10, ValueAxisMinScale = 0, fillColor = "red", animationDisplay = FALSE, animationTime = 2000, animationDelay = 20, data, ... )
modulename |
The name of the new module |
compareGroup |
The group number of this module in compare module |
maxRadius, minRadius |
Where the module should begin and end |
ValueAxisManualScale |
Whether manually control the scale of value |
ValueAxisMaxScale, ValueAxisMinScale |
The max and min scale value for manually control |
fillColor |
The color for histgram |
animationDisplay |
Whether display animation |
animationTime, animationDelay |
The time and delay for animation |
data |
A list of value with details including chr, start, end, name, link, value and html. Details can be found on document |
... |
Ignored |
The module tracks for histogram modules
histogramData<-histogramExample Circos(CircosHistogram('HISTOGRAM01', data = histogramData,fillColor= "#ff7f0e",maxRadius = 210, minRadius = 175),genome=list("2L"=23011544,"2R"=21146708,"3L"=24543557,"3R"= 27905053, "X"=22422827,"4"=1351857), outerRadius = 220)