GeneAnswers

DOI: 10.18129/B9.bioc.GeneAnswers    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.14 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see GeneAnswers.

Integrated Interpretation of Genes

Bioconductor version: Release (3.14)

GeneAnswers provides an integrated tool for biological or medical interpretation of the given one or more groups of genes by means of statistical test.

Author: Lei Huang, Gang Feng, Pan Du, Tian Xia, Xishu Wang, Jing, Wen, Warren Kibbe and Simon Lin

Maintainer: Lei Huang <lhuang1998 at gmail.com> and Gang Feng <gilbert.feng at qq.com>

Installation

To install this package, start R (version "4.1") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GeneAnswers")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GeneAnswers")

 

PDF		GeneAnswers
PDF	R Script	GeneAnswers web-based visualization module
PDF		Reference Manual
Text		NEWS

Details

biocViews	DataRepresentation, GraphsAndNetworks, Infrastructure, Software, Visualization
Version	2.36.0
In Bioconductor since	BioC 2.5 (R-2.10) (12.5 years)
License	LGPL (>= 2)
Depends	R (>= 3.0.0), igraph, KEGGREST, RCurl, annotate, Biobase(>= 1.12.0), methods, XML, RSQLite, MASS, Heatplus, RColorBrewer
Imports	RBGL, annotate, downloader
LinkingTo
Suggests	GO.db, reactome.db, biomaRt, AnnotationDbi, org.Hs.eg.db, org.Rn.eg.db, org.Mm.eg.db, org.Dm.eg.db, graph
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	InterMineR
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	GeneAnswers_2.36.0.tar.gz
Windows Binary	GeneAnswers_2.36.0.zip
macOS 10.13 (High Sierra)	GeneAnswers_2.36.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/GeneAnswers
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/GeneAnswers
Package Short Url	https://bioconductor.org/packages/GeneAnswers/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.14	Source Archive