RchyOptimyx

DOI: 10.18129/B9.bioc.RchyOptimyx    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.13 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see RchyOptimyx.

Optimyzed Cellular Hierarchies for Flow Cytometry

Bioconductor version: Release (3.13)

Constructs a hierarchy of cells using flow cytometry for maximization of an external variable (e.g., a clinical outcome or a cytokine response).

Author: Adrin Jalali, Nima Aghaeepour

Maintainer: Adrin Jalali <adrin.jalali at gmail.com>, Nima Aghaeepour <naghaeep at gmail.com>

Installation

To install this package, start R (version "4.1") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RchyOptimyx")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	FlowCytometry, Software
Version	2.32.0
In Bioconductor since	BioC 2.10 (R-2.15) (9.5 years)
License	Artistic-2.0
Depends	R (>= 2.10)
Imports	Rgraphviz, sfsmisc, graphics, methods, graph, grDevices, flowType (>= 2.0.0)
LinkingTo
Suggests	flowCore
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/RchyOptimyx
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/RchyOptimyx
Package Short Url	https://bioconductor.org/packages/RchyOptimyx/
Package Downloads Report	Download Stats