This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see SEtools.
Bioconductor version: 3.10
This includes a set of tools for working with the SummarizedExperiment class, including handy merging and plotting functions.
Author: Pierre-Luc Germain [cre, aut]
Maintainer: Pierre-Luc Germain <pierre-luc.germain at hest.ethz.ch>
Citation (from within R,
enter citation("SEtools")
):
To install this package, start R (version "3.6") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("SEtools")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SEtools")
HTML | R Script | SEtools |
Reference Manual |
biocViews | DataRepresentation, Software, Visualization |
Version | 1.0.0 |
In Bioconductor since | BioC 3.10 (R-3.6) (< 6 months) |
License | GPL |
Depends | R (>= 3.6) |
Imports | SummarizedExperiment, data.table, pheatmap, seriation, ComplexHeatmap, circlize, methods |
LinkingTo | |
Suggests | BiocStyle, knitr, rmarkdown, ggplot2 |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | SEtools_1.0.0.tar.gz |
Windows Binary | SEtools_1.0.0.zip |
Mac OS X 10.11 (El Capitan) | SEtools_1.0.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/SEtools |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/SEtools |
Package Short Url | https://bioconductor.org/packages/SEtools/ |
Package Downloads Report | Download Stats |
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