Back to Workflows build report for BioC 3.19 |
This page was generated on 2024-06-28 16:30 -0400 (Fri, 28 Jun 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4760 |
palomino3 | Windows Server 2022 Datacenter | x64 | 4.4.0 (2024-04-24 ucrt) -- "Puppy Cup" | 4495 |
merida1 | macOS 12.7.4 Monterey | x86_64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4509 |
palomino7 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4408 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 12/30 | Hostname | OS / Arch | INSTALL | BUILD | ||||||||
fluentGenomics 1.16.0 (landing page) Stuart Lee
| nebbiolo1 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | ![]() | |||||||
palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | |||||||||
merida1 | macOS 12.7.4 Monterey / x86_64 | OK | OK | |||||||||
palomino7 | Windows Server 2022 Datacenter / x64 | OK | ERROR | |||||||||
To the developers/maintainers of the fluentGenomics package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: fluentGenomics |
Version: 1.16.0 |
Command: chmod a+r fluentGenomics -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data fluentGenomics |
StartedAt: 2024-06-28 13:05:37 -0400 (Fri, 28 Jun 2024) |
EndedAt: 2024-06-28 13:06:55 -0400 (Fri, 28 Jun 2024) |
EllapsedTime: 77.7 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r fluentGenomics -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data fluentGenomics ### ############################################################################## ############################################################################## * checking for file 'fluentGenomics/DESCRIPTION' ... OK * preparing 'fluentGenomics': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'fluentGenomics.Rmd' using rmarkdown Quitting from lines 191-195 [tximeta-run] (fluentGenomics.Rmd) Error: processing vignette 'fluentGenomics.Rmd' failed with diagnostics: Corrupt Cache: index file See AnnotationHub's TroubleshootingTheHubs vignette section on corrupt cache cache: F:\biocbuild\AnnotationHub_cache filename: annotationhub.index.rds --- failed re-building 'fluentGenomics.Rmd' SUMMARY: processing the following file failed: 'fluentGenomics.Rmd' Error: Vignette re-building failed. Execution halted