Back to BiocCheck report for a small subset of BioC 3.19 packages

This page was generated on 2024-07-15 11:15:01 -0400 (Mon, 15 Jul 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.2 LTS)x86_644.4.1 (2024-06-14) -- "Race for Your Life" 4742
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 26/119HostnameOS / ArchBUILDBIOCCHECK
biomaRt 2.61.2  (landing page)
Mike Smith
Snapshot Date: 2024-07-15 10:00:01 -0400 (Mon, 15 Jul 2024)
git_url: https://git.bioconductor.org/packages/biomaRt
git_branch: devel
git_last_commit: ddf78e1
git_last_commit_date: 2024-06-24 05:22:38 -0400 (Mon, 24 Jun 2024)
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    WARNINGS  

BUILD results for biomaRt on nebbiolo1


To the developers/maintainers of the biomaRt package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: biomaRt
Version: 2.61.2
Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data biomaRt
StartedAt: 2024-07-15 10:28:06 -0400 (Mon, 15 Jul 2024)
EndedAt: 2024-07-15 10:30:23 -0400 (Mon, 15 Jul 2024)
EllapsedTime: 137.0 seconds
RetCode: 0
Status:   OK  
PackageFile: biomaRt_2.61.2.tar.gz
PackageFileSize: 843.1 KiB

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data biomaRt
###
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* checking for file ‘biomaRt/DESCRIPTION’ ... OK
* preparing ‘biomaRt’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘biomaRt_2.61.2.tar.gz’