Multiple platform build/check report for BioC 3.19 - INSTALL results for lisaClust on nebbiolo1

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This page was generated on 2024-05-31 17:03:03 -0400 (Fri, 31 May 2024).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 22.04.3 LTS)	x86_64	4.4.0 (2024-04-24) -- "Puppy Cup"	4753
kjohnson3	macOS 13.6.5 Ventura	arm64	4.4.0 (2024-04-24) -- "Puppy Cup"	4464
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

lisaClust 1.12.0 (landing page)
Ellis Patrick

Snapshot Date: 2024-05-30 18:28:32 -0400 (Thu, 30 May 2024)

git_url: https://git.bioconductor.org/packages/lisaClust

git_branch: RELEASE_3_19

git_last_commit: 580e374

git_last_commit_date: 2024-04-30 11:32:02 -0400 (Tue, 30 Apr 2024)

nebbiolo1

Linux (Ubuntu 22.04.3 LTS) / x86_64

ERROR

skipped

kjohnson3

macOS 13.6.5 Ventura / arm64

ERROR

skipped

INSTALL results for lisaClust on nebbiolo1

To the developers/maintainers of the lisaClust package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/lisaClust.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: lisaClust

Version: 1.12.0

Command: /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD INSTALL lisaClust

StartedAt: 2024-05-30 20:41:05 -0400 (Thu, 30 May 2024)

EndedAt: 2024-05-30 20:41:15 -0400 (Thu, 30 May 2024)

EllapsedTime: 10.1 seconds

RetCode: 1

Status: ERROR

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD INSTALL lisaClust
###
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* installing to library ‘/home/biocbuild/bbs-3.19-bioc/R/site-library’
* installing *source* package ‘lisaClust’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error: object ‘cellAnnotation<-’ is not exported by 'namespace:spicyR'
Execution halted
ERROR: lazy loading failed for package ‘lisaClust’
* removing ‘/home/biocbuild/bbs-3.19-bioc/R/site-library/lisaClust’
* restoring previous ‘/home/biocbuild/bbs-3.19-bioc/R/site-library/lisaClust’